Finding the characterized proteins for DAPtransferase (L,L-diaminopimelate aminotransferase) in L-lysine biosynthesis
Or see clustering for step DAPtransferase
Or see all steps for L-lysine biosynthesis
Or cluster curated proteins matching a keyword
Definition of DAPtransferase
Fetched 24 sequences
Running ublast to find other characterized proteins with 40% identity and 70% coverage
Found hits to 6 other characterized sequences. (Found 30 hits including self hits.)
There are also 1 HMM-only high-coverage hits.
(Sequences that are similar to these will not be high-confidence candidates for DAPtransferase.)
Q8YTF2 aspartate transaminase (EC 2.6.1.1) from Nostoc sp.
PFams: Aminotran_1_2
403 amino acids: PaperBLAST, CDD, BRENDA::Q8YTF2
49% identical to
Q3MDN5 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Trichormus variabilis
PFams: Aminotran_1_2
390 amino acids: PaperBLAST, CDD
O31665 L-glutamine:4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117; EC 2.6.1.88) from Bacillus subtilis (strain 168)
MTNE_BACSU / O31665 L-glutamine--4-(methylsulfanyl)-2-oxobutanoate aminotransferase; GTK; Glutamine transaminase MtnE; EC 2.6.1.117 from Bacillus subtilis (strain 168)
O31665 L-glutamine-4-(methylsulfanyl)-2-oxobutanoate aminotransferase (EC 2.6.1.117) from Bacillus subtilis
PFams: Aminotran_1_2
398 amino acids: PaperBLAST, CDD, BRENDA::O31665
45% identical to
Q8TQ40 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans
PFams: Aminotran_1_2
389 amino acids: PaperBLAST, CDD
P39643 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis (strain 168)
BACF_BACSU / P39643 Transaminase BacF; Transaminase A; EC 2.6.1.- from Bacillus subtilis (strain 168)
PFams: Aminotran_1_2
399 amino acids: PaperBLAST, CDD, SwissProt::P39643
41% identical to
DAPAT_SYNFM / A0LEA5 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
A0LEA5 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Syntrophobacter fumaroxidans
PFams: Aminotran_1_2
388 amino acids: PaperBLAST, CDD
b2379 glutamate—pyruvate aminotransferase AlaC (EC 2.6.1.2) from Escherichia coli K-12 substr. MG1655
P77434 glutamate—pyruvate aminotransferase AlaC (EC 2.6.1.2) from Escherichia coli (strain K12)
ALAC_ECOLI / P77434 Glutamate-pyruvate aminotransferase AlaC; EC 2.6.1.2 from Escherichia coli (strain K12)
PFams: Aminotran_1_2
412 amino acids: PaperBLAST, CDD, SwissProt::P77434
42% identical to
DAPAT_MOOTA / Q2RK33 LL-diaminopimelate aminotransferase; DAP-AT; DAP-aminotransferase; LL-DAP-aminotransferase; EC 2.6.1.83 from Moorella thermoacetica (strain ATCC 39073 / JCM 9320)
Q2RK33 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Moorella thermoacetica
PFams: Aminotran_1_2
390 amino acids: PaperBLAST, CDD
D2Z0I0 alanine-glyoxylate transaminase (EC 2.6.1.44) from Hydrogenobacter thermophilus
PFams: Aminotran_1_2
402 amino acids: PaperBLAST, CDD, BRENDA::D2Z0I0
41% identical to
Q8TQ40 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans
PFams: Aminotran_1_2
389 amino acids: PaperBLAST, CDD
Q8YUK5 aspartate transaminase (EC 2.6.1.1) from Nostoc sp.
PFams: Aminotran_1_2
404 amino acids: PaperBLAST, CDD, BRENDA::Q8YUK5
41% identical to
Q8TQ40 LL-diaminopimelate aminotransferase (EC 2.6.1.83) from Methanosarcina acetivorans
PFams: Aminotran_1_2
389 amino acids: PaperBLAST, CDD
(Since these sequences' annotations are outside the definition for DAPtransferase, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)
A0A1E7FWR0 L-methionine transaminase (EC 2.6.1.88) from Fragilariopsis cylindrus CCMP1102
PFams: Aminotran_1_2
418 amino acids: PaperBLAST, CDD