Clusters of Characterized Proteins

GapMind for Amino acid biosynthesis

Clusters of Characterized Proteins

Clustering the characterized proteins for dapA (4-hydroxy-tetrahydrodipicolinate synthase) in L-lysine biosynthesis

Or see other characterized proteins similar to dapA

Or see all steps for L-lysine biosynthesis

Or cluster curated proteins matching a keyword

Definition of dapA

Curated proteins or TIGRFams with EC 4.3.3.7

Fetched 24 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 20 of these sequences

Found 1 clusters of similar sequences. Another 6 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 289-365 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q81WN7 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
CH_021853 dihydrodipicolinate synthase; EC 4.2.1.52
PFams: DHDPS
292 amino acids: PaperBLAST, CDD, Compare to cluster

A9CFV4 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
303 amino acids: PaperBLAST, CDD, Compare to cluster

O67216 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
294 amino acids: PaperBLAST, CDD, Compare to cluster

DIHYDRODIPICSYN-MONOMER 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
P0A6L2 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7
P0A6L2 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
DIHYDRODIPICSYN-MONOMER 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
292 amino acids: PaperBLAST, CDD, Compare to cluster

P19808 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
301 amino acids: PaperBLAST, CDD, Compare to cluster

Q07607 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; Protein MosA; EC 4.3.3.7
Q07607 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
292 amino acids: PaperBLAST, CDD, Compare to cluster

Q5HG25 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7
Q5HG25 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
295 amino acids: PaperBLAST, CDD, Compare to cluster

Q6GH13 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7
Q6GH13 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
295 amino acids: PaperBLAST, CDD, Compare to cluster

Q7CU96 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
298 amino acids: PaperBLAST, CDD, Compare to cluster

Q7D3Z9 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
297 amino acids: PaperBLAST, CDD, Compare to cluster

Q8RBI5 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
297 amino acids: PaperBLAST, CDD, Compare to cluster

Q8UGL3 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7
Q8UGL3 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
294 amino acids: PaperBLAST, CDD, Compare to cluster

Q9FVC8 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
365 amino acids: PaperBLAST, CDD, Compare to cluster

Q9I4W3 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7
Q9I4W3 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
292 amino acids: PaperBLAST, CDD, Compare to cluster

Q9JZR4 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7
Q9JZR4 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
291 amino acids: PaperBLAST, CDD, Compare to cluster

P9WP25 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7
PFams: DHDPS
300 amino acids: PaperBLAST, CDD, Compare to cluster

Q57695 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7
PFams: DHDPS
289 amino acids: PaperBLAST, CDD, Compare to cluster

Q9X1K9 4-hydroxy-tetrahydrodipicolinate synthase; HTPA synthase; EC 4.3.3.7
PFams: DHDPS
294 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/6 heteromeric)

A9CGZ4 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
321 amino acids: PaperBLAST, CDD
(similar to BRENDA::O67216 from Cluster 1, but similarity to seed sequence is below thresholds)

A9CHR2 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
294 amino acids: PaperBLAST, CDD

A9CL94 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
309 amino acids: PaperBLAST, CDD

A9CL97 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
313 amino acids: PaperBLAST, CDD

Q7D0E8 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
302 amino acids: PaperBLAST, CDD
(similar to BRENDA::O67216 from Cluster 1, but similarity to seed sequence is below thresholds)

Q7D313 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
PFams: DHDPS
302 amino acids: PaperBLAST, CDD