GapMind for Amino acid biosynthesis


Other Characterized Proteins Similar to dapB

Finding the characterized proteins for dapB (4-hydroxy-tetrahydrodipicolinate reductase) in L-lysine biosynthesis

Or see clustering for step dapB

Or see all steps for L-lysine biosynthesis

Or cluster curated proteins matching a keyword

Definition of dapB

Fetched 19 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 0 other characterized sequences. (Found 17 hits including self hits.)

There are also 1 HMM-only high-coverage hits.

HMM-only sequences

(Since these sequences' annotations are outside the definition for dapB, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)

DAPB3_ARATH / Q9FJ82 Dihydrodipicolinate reductase-like protein CRR1, chloroplastic; 4-hydroxy-tetrahydrodipicolinate reductase 3; HTPA reductase 3; Protein CHLORORESPIRATORY REDUCTION 1 from Arabidopsis thaliana (Mouse-ear cress)
PFams: DapB_N, DapB_C
298 amino acids: PaperBLAST, CDD