Other Characterized Proteins Similar to dapC

GapMind for Amino acid biosynthesis

Other Characterized Proteins Similar to dapC

Finding the characterized proteins for dapC (N-succinyldiaminopimelate aminotransferase) in L-lysine biosynthesis

Or see clustering for step dapC

Or see all steps for L-lysine biosynthesis

Or cluster curated proteins matching a keyword

Definition of dapC

Curated proteins or TIGRFams with EC 2.6.1.17
Curated proteins or TIGRFams with EC 2.6.1.52
Comment: 2.6.1.52 is the EC number for 3-phosphoserine aminotransferase (serC), which catalyzes this reaction in E. coli

Fetched 22 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 11 other characterized sequences. (Found 33 hits including self hits.)

There are also 1 HMM-only high-coverage hits.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for dapC.)

O30508 Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81
O30508 succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD, BRENDA::O30508
66% identical to

ACETYLORNTRANSAM-MONOMER N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (EC 2.6.1.11; EC 2.6.1.17)
P18335 Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17
ACETYLORNTRANSAM-MONOMER N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (EC 2.6.1.11; EC 2.6.1.17)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD

WCS417:GFF4238 Succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF4238
64% identical to

Marino:GFF3099 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
PFams: Aminotran_3
404 amino acids: PaperBLAST, CDD

pseudo1_N1B4:Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3
406 amino acids: PaperBLAST, CDD, reanno::pseudo1_N1B4:Pf1N1B4_3440
64% identical to

Q8ZPV2 Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81
PFams: Aminotran_3, Aminotran_1_2
408 amino acids: PaperBLAST, CDD, SwissProt::Q8ZPV2
62% identical to

P40732 Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17
PFams: Aminotran_3, Aminotran_1_2
405 amino acids: PaperBLAST, CDD

SUCCORNTRANSAM-MONOMER succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11)
P77581 Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81
SUCCORNTRANSAM-MONOMER succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11)
CH_002469 succinylornithine transaminase; EC 2.6.1.81
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD, CharProtDB::CH_002469
61% identical to

A0A140N9B6 succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD, BRENDA::A0A140N9B6
61% identical to

Koxy:BWI76_RS11670 Succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3
406 amino acids: PaperBLAST, CDD, reanno::Koxy:BWI76_RS11670
60% identical to

Q9X1C0 Serine-pyruvate aminotransferase; SAT; EC 2.6.1.51
PFams: Aminotran_5, Beta_elim_lyase, Aminotran_1_2, Cys_Met_Meta_PP
384 amino acids: PaperBLAST, CDD, SwissProt::Q9X1C0
43% identical to

P74281 phosphoserine transaminase (EC 2.6.1.52)
PFams: Aminotran_5, Cys_Met_Meta_PP
384 amino acids: PaperBLAST, CDD

Q9M8M7 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11
PFams: Aminotran_3
457 amino acids: PaperBLAST, CDD, SwissProt::Q9M8M7
43% identical to

azobra:AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
PFams: Aminotran_3
389 amino acids: PaperBLAST, CDD

A8J933 acetylornithine transaminase (EC 2.6.1.11)
PFams: Aminotran_3
460 amino acids: PaperBLAST, CDD, BRENDA::A8J933
41% identical to

Marino:GFF3099 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
PFams: Aminotran_3
404 amino acids: PaperBLAST, CDD

Q93R93 [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.-
PFams: Aminotran_3
395 amino acids: PaperBLAST, CDD, SwissProt::Q93R93
41% identical to

HMM-only sequences

(Since these sequences' annotations are outside the definition for dapC, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)

Q3S8P9 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ; PLP-dependent aminotransferase OxyQ; Reductive transaminase oxyQ; EC 2.6.1.-
MONOMER-19941 4-dedimethylamino-4-oxo-anhydrotetracycline
PFams: Aminotran_1_2
359 amino acids: PaperBLAST, CDD