GapMind for Amino acid biosynthesis


Other Characterized Proteins Similar to dapF

Finding the characterized proteins for dapF (diaminopimelate epimerase) in L-lysine biosynthesis

Or see clustering for step dapF

Or see all steps for L-lysine biosynthesis

Or cluster curated proteins matching a keyword

Definition of dapF

Fetched 10 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 0 other characterized sequences. (Found 9 hits including self hits.)

There are also 1 HMM-only high-coverage hits.

HMM-only sequences

(Since these sequences' annotations are outside the definition for dapF, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)

D2Z026 O-ureido-serine racemase (EC from Streptomyces lavendulae
DCSC_STRLA / D2Z026 O-ureido-serine racemase; EC from Streptomyces lavendulae
D2Z026 O-ureido-serine racemase (EC from Streptomyces lavendulae subsp. lavendulae
PFams: DAP_epimerase, DAP_epimerase
287 amino acids: PaperBLAST, CDD