GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for hicdh (homo-isocitrate dehydrogenase) in L-lysine biosynthesis

Or see other characterized proteins similar to hicdh

Or see all steps for L-lysine biosynthesis

Or cluster curated proteins matching a keyword

Definition of hicdh

Fetched 12 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 12 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 334-411 amino acids (5/12 heteromeric)

The first sequence in each cluster is the seed.

P40495 Homoisocitrate dehydrogenase, mitochondrial; HIcDH; EC 1.1.1.87
P40495 homoisocitrate dehydrogenase (EC 1.1.1.87)
PFams: Iso_dh
371 amino acids: PaperBLAST, CDD, Compare to cluster

ENSG00000166411-MONOMER Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial (EC 1.1.1.286)
P50213 Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial; Isocitric dehydrogenase subunit alpha; NAD(+)-specific ICDH subunit alpha; EC 1.1.1.41
P50213 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41)
PFams: Iso_dh
Heteromeric, 366 amino acids: PaperBLAST, CDD, Compare to cluster

AT2G17130-MONOMER NAD+-dependent isocitrate dehydrogenase regulatory subunit (EC 1.1.1.286)
P93032 Isocitrate dehydrogenase [NAD] regulatory subunit 2, mitochondrial; IDH-II; Isocitric dehydrogenase 2; NAD(+)-specific ICDH 2; EC 1.1.1.41
P93032 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41)
PFams: Iso_dh
Heteromeric, 367 amino acids: PaperBLAST, CDD, Compare to cluster

Q4J6C9 isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286)
PFams: Iso_dh
411 amino acids: PaperBLAST, CDD, Compare to cluster

MONOMER-2004 NAD-dependent threo-isocitrate dehydrogenase (EC 1.1.1.87)
Q58991 Homoisocitrate dehydrogenase; HICDH; Isohomocitrate dehydrogenase; IHDH; NAD-dependent threo-isohomocitrate dehydrogenase; EC 1.1.1.87
Q58991 methanogen homoaconitase (EC 4.2.1.114)
PFams: Iso_dh
347 amino acids: PaperBLAST, CDD, Compare to cluster

Q5JFV8 isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286)
PFams: Iso_dh
347 amino acids: PaperBLAST, CDD, Compare to cluster

Q5SIJ1 Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87
Q72IW9 Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87
Q5SIJ1 homoisocitrate dehydrogenase (EC 1.1.1.87)
Q72IW9 isocitrate-homoisocitrate dehydrogenase (EC 1.1.1.286); 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
PFams: Iso_dh
334 amino acids: PaperBLAST, CDD, Compare to cluster

AT5G03290-MONOMER NAD+-dependent isocitrate dehydrogenase catalytic subunit (EC 1.1.1.286)
Q945K7 Isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial; IDH-V; Isocitric dehydrogenase 5; NAD(+)-specific ICDH 5; EC 1.1.1.41
Q945K7 isocitrate dehydrogenase (NAD+) (EC 1.1.1.41)
PFams: Iso_dh
Heteromeric, 374 amino acids: PaperBLAST, CDD, Compare to cluster

O14104 Homoisocitrate dehydrogenase; HICDH; EC 1.1.1.87
PFams: Iso_dh
362 amino acids: PaperBLAST, CDD, Compare to cluster

ENSG00000101365-MONOMER Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial (EC 1.1.1.286)
O43837 Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial; Isocitric dehydrogenase subunit beta; NAD(+)-specific ICDH subunit beta
PFams: Iso_dh
Heteromeric, 385 amino acids: PaperBLAST, CDD, Compare to cluster

O59394 Isocitrate--homoisocitrate dehydrogenase; HICDH; Beta-decarboxylating dehydrogenase; EC 1.1.1.286
PFams: Iso_dh
345 amino acids: PaperBLAST, CDD, Compare to cluster

ENSG00000067829-MONOMER Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial (EC 1.1.1.286)
P51553 Isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial; Isocitric dehydrogenase subunit gamma; NAD(+)-specific ICDH subunit gamma
PFams: Iso_dh
Heteromeric, 393 amino acids: PaperBLAST, CDD, Compare to cluster