GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for lysT (homoaconitase large subunit) in L-lysine biosynthesis

Or see other characterized proteins similar to lysT

Or see all steps for L-lysine biosynthesis

Or cluster curated proteins matching a keyword

Definition of lysT

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 418-420 amino acids (heteromeric)

The first sequence in each cluster is the seed.

MONOMER-2003 homoaconitase α subunit (EC 4.2.1.114; EC 4.2.1.36)
Q58409 Methanogen homoaconitase large subunit; HACN; Homoaconitate hydratase; EC 4.2.1.114
Q58409 methanogen homoaconitase (EC 4.2.1.114)
CH_091727 homoaconitase; EC 4.2.1.-; EC 4.2.1.36
PFams: Aconitase
Heteromeric, 420 amino acids: PaperBLAST, CDD, Compare to cluster

Q9ZNE0 Homoaconitase large subunit; HACN; Homoaconitate hydratase; EC 4.2.1.36
PFams: Aconitase
Heteromeric, 418 amino acids: PaperBLAST, CDD, Compare to cluster