GapMind for Amino acid biosynthesis

 

Other Characterized Proteins Similar to asd

Finding the characterized proteins for asd (aspartate semi-aldehyde dehydrogenase) in L-methionine biosynthesis

Or see clustering for step asd

Or see all steps for L-methionine biosynthesis

Or cluster curated proteins matching a keyword

Definition of asd

Fetched 19 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 20 hits including self hits.)

There are also 2 HMM-only high-coverage hits.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for asd.)

RF|NP_416822 USG-1 protein from Escherichia coli K12
PFams: Semialdhyde_dh, Semialdhyde_dhC
337 amino acids: PaperBLAST, CDD, CharProtDB::CH_024644
47% identical to

DHAS2_VIBCH / P23247 Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
PFams: Semialdhyde_dh, Semialdhyde_dhC
337 amino acids: PaperBLAST, CDD

HMM-only sequences

(Since these sequences' annotations are outside the definition for asd, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)

Q96YK1 malonyl-CoA reductase subunit (EC 1.2.1.75) from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
MCR_SULTO / Q96YK1 Malonyl-CoA reductase; EC 1.2.1.75 from Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (Sulfolobus tokodaii)
Q96YK1 malonyl-CoA reductase (malonate semialdehyde-forming) (EC 1.2.1.75) from Sulfurisphaera tokodaii
PFams: Semialdhyde_dh, Semialdhyde_dhC
359 amino acids: PaperBLAST, CDD

A4YEN2 succinyl-CoA reductase (NADPH) subunit (EC 1.2.1.75; EC 1.2.1.76) from Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)
MCR_METS5 / A4YEN2 Malonyl CoA reductase (NADP); NADP-dependent malonyl CoA reductase; EC 1.2.1.75 from Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)
PFams: Semialdhyde_dh, Semialdhyde_dhC
357 amino acids: PaperBLAST, CDD