GapMind for Amino acid biosynthesis


Clusters of Characterized Proteins

Clustering the characterized proteins for asd-S-ferredoxin (reductive sulfuration of L-aspartate semialdehyde, ferredoxin component) in L-methionine biosynthesis

Or see other characterized proteins similar to asd-S-ferredoxin

Or see all steps for L-methionine biosynthesis

Or cluster curated proteins matching a keyword

Definition of asd-S-ferredoxin

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 130-147 amino acids (1/3 heteromeric)

The first sequence in each cluster is the seed.

A6UQ02 4Fe-4S ferredoxin iron-sulfur binding domain protein
132 amino acids: PaperBLAST, CDD, Compare to cluster

ASSTI_METAC / Q8TPT3 L-aspartate semialdehyde sulfurtransferase iron-sulfur subunit from Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
PFams: NIL, Fer4_10, Fer4, Fer4_4, Fer4_9, Fer4_3, Fer4_7, Fer4_6, Fer4, Fer4_4, Fer4_3
130 amino acids: PaperBLAST, CDD, Compare to cluster

DvMF_0262 Homocysteine formation from aspartate semialdehyde (NIL/ferredoxin component) from Desulfovibrio vulgaris Miyazaki F
PFams: NIL, Fer4_10, Fer4_6, Fer4, Fer4_21, Fer4_4, Fer4_7, Fer4_9, Fer4_2, Fer4_6, Fer4, Fer4_4
Heteromeric, 147 amino acids: PaperBLAST, CDD, Compare to cluster