GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for hom_kinase (homoserine kinase) in L-methionine biosynthesis

Or see other characterized proteins similar to hom_kinase

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Definition of hom_kinase

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Another 3 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 301-370 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q8L7R2 Homoserine kinase; Protein DOWNY MILDEW RESISTANT 1; EC 2.7.1.39
Q8L7R2 homoserine kinase (EC 2.7.1.39)
MONOMER-1961 homoserine kinase (EC 2.7.1.39)
PFams: GHMP_kinases_N, GHMP_kinases_C
370 amino acids: PaperBLAST, CDD, Compare to cluster

HOMOSERKIN-MONOMER homoserine kinase (EC 2.7.1.39)
P00547 Homoserine kinase; HK; HSK; EC 2.7.1.39
CH_002113 homoserine kinase; EC 2.7.1.39
PFams: GHMP_kinases_N, GHMP_kinases_C
310 amino acids: PaperBLAST, CDD, Compare to cluster

Q6M0H5 Homoserine kinase; HK; HSK; EC 2.7.1.39
PFams: GHMP_kinases_N, GHMP_kinases_C
301 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/3 heteromeric)

P17423 Homoserine kinase; HK; HSK; EC 2.7.1.39
PFams: GHMP_kinases_N
357 amino acids: PaperBLAST, CDD

P29364 Homoserine kinase; HK; HSK; EC 2.7.1.39
PFams: APH
316 amino acids: PaperBLAST, CDD

Miya:8500213 Homoserine kinase (EC:2.7.1.39)
PFams: Cytidylate_kin, AAA_33, SKI
185 amino acids: PaperBLAST, CDD