GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for aro-dehydratase (arogenate dehydratase) in L-phenylalanine biosynthesis

Or see other characterized proteins similar to aro-dehydratase

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Definition of aro-dehydratase

Fetched 10 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 9 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 381-434 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

D3U717 arogenate dehydratase (EC 4.2.1.91)
PFams: PDT
434 amino acids: PaperBLAST, CDD, Compare to cluster

D3U715 arogenate dehydratase (EC 4.2.1.91)
PFams: PDT
424 amino acids: PaperBLAST, CDD, Compare to cluster

O22241 Arogenate dehydratase 4, chloroplastic; AtADT4; EC 4.2.1.91
O22241 arogenate dehydratase (EC 4.2.1.91)
PFams: PDT
424 amino acids: PaperBLAST, CDD, Compare to cluster

Q9FNJ8 Arogenate dehydratase 5, chloroplastic; AtADT5; EC 4.2.1.91
Q9FNJ8 arogenate dehydratase (EC 4.2.1.91)
PFams: PDT
425 amino acids: PaperBLAST, CDD, Compare to cluster

Q9SA96 Arogenate dehydratase/prephenate dehydratase 1, chloroplastic; AtADT1; AtPDT1; EC 4.2.1.51; EC 4.2.1.91
Q9SA96 arogenate dehydratase (EC 4.2.1.91)
PFams: PDT
392 amino acids: PaperBLAST, CDD, Compare to cluster

Q9SGD6 Arogenate dehydratase/prephenate dehydratase 6, chloroplastic; AtADT6; AtPDT6; EC 4.2.1.51; EC 4.2.1.91
Q9SGD6 arogenate dehydratase (EC 4.2.1.91)
PFams: PDT
413 amino acids: PaperBLAST, CDD, Compare to cluster

Q9SSE7 Arogenate dehydratase/prephenate dehydratase 2, chloroplastic; AtADT2; AtPDT2; EC 4.2.1.51; EC 4.2.1.91
Q9SSE7 arogenate dehydratase (EC 4.2.1.91)
PFams: PDT
381 amino acids: PaperBLAST, CDD, Compare to cluster

Q9ZUY3 Arogenate dehydratase 3, chloroplastic; AtADT3; Prephenate dehydratase 1; AtPDT1; EC 4.2.1.91
Q9ZUY3 prephenate dehydratase (EC 4.2.1.51); arogenate dehydratase (EC 4.2.1.91)
PFams: PDT
424 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

D3U716 arogenate dehydratase (EC 4.2.1.91)
PFams: PDT
394 amino acids: PaperBLAST, CDD
(similar to BRENDA::Q9SA96 from Cluster 1, but similarity to seed sequence is below thresholds)

Q01269 Cyclohexadienyl dehydratase; EC 4.2.1.51; EC 4.2.1.91
Q01269 arogenate dehydratase (EC 4.2.1.91)
PFams: SBP_bac_3
268 amino acids: PaperBLAST, CDD