GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for cmutase (chorismate mutase) in L-phenylalanine biosynthesis

Or see other characterized proteins similar to cmutase

Or see all steps for L-phenylalanine biosynthesis

Or cluster curated proteins matching a keyword

Definition of cmutase

Fetched 30 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 26 of these sequences

Found 9 clusters of similar sequences. Another 4 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 263-340 amino acids (not heteromeric)

D2CSU4 Chorismate mutase (EC 5.4.99.5)
324 amino acids: PaperBLAST, CDD, Compare to cluster

D2CSU5 Chorismate mutase (EC 5.4.99.5)
263 amino acids: PaperBLAST, CDD, Compare to cluster

CH_122283 chorismate mutase; EC 5.4.99.5
267 amino acids: PaperBLAST, CDD, Compare to cluster

P42738 Chorismate mutase 1, chloroplastic; AtCM1; CM-1; EC 5.4.99.5
AT3G29200-MONOMER chorismate mutase (EC 5.4.99.5)
340 amino acids: PaperBLAST, CDD, Compare to cluster

Q9C544 Chorismate mutase 3, chloroplastic; AtCM3; CM-3; EC 5.4.99.5
AT1G69370-MONOMER chorismate mutase (EC 5.4.99.5)
316 amino acids: PaperBLAST, CDD, Compare to cluster

Q9S7H4 Chorismate mutase 2; AtCM2; CM-2; EC 5.4.99.5
AT5G10870-MONOMER chorismate mutase (EC 5.4.99.5)
265 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 365-386 amino acids (not heteromeric)

C7EXK8 prephenate dehydratase (EC 4.2.1.51) (from HMM only)
PFams: CM_2, PDT
386 amino acids: PaperBLAST, CDD, Compare to cluster

P57472 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51
P57472 prephenate dehydratase (EC 4.2.1.51)
PFams: CM_2, PDT
385 amino acids: PaperBLAST, CDD, Compare to cluster

CHORISMUTPREPHENDEHYDRAT-MONOMER fused chorismate mutase/prephenate dehydratase (EC 5.4.99.5; EC 4.2.1.51)
P0A9J8 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51
CH_024084 P-protein; EC 4.2.1.51; EC 5.4.99.5
PFams: CM_2, PDT
386 amino acids: PaperBLAST, CDD, Compare to cluster

P27603 Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC 5.4.99.5; EC 4.2.1.51
PFams: CM_2, PDT, ACT
365 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 181-199 amino acids (not heteromeric)

Q9HU05 Monofunctional chorismate mutase; EC 5.4.99.5
PFams: CM_2
185 amino acids: PaperBLAST, CDD, Compare to cluster

P9WIB9 Secreted chorismate mutase; *MtCM; CM; EC 5.4.99.5
P9WIB9 Chorismate mutase (EC 5.4.99.5)
PFams: CM_2
199 amino acids: PaperBLAST, CDD, Compare to cluster

A0QU81 Secreted chorismate mutase; CM; EC 5.4.99.5
PFams: CM_2
181 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 4 181-186 amino acids (not heteromeric)

P42517 Monofunctional chorismate mutase; CM-F; EC 5.4.99.5
PFams: CM_2
181 amino acids: PaperBLAST, CDD, Compare to cluster

Q7CHH5 Secreted chorismate mutase; *MtCM; CM; EC 5.4.99.5
Q7CHH5 Chorismate mutase (EC 5.4.99.5)
PFams: CM_2
186 amino acids: PaperBLAST, CDD, Compare to cluster

Q93LJ4 Monofunctional chorismate mutase; EC 5.4.99.5
PFams: CM_2
181 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 5 373-377 amino acids (not heteromeric)

P43902 prephenate dehydrogenase (EC 1.3.1.12) (from HMM only)
PFams: CM_2, PDH
377 amino acids: PaperBLAST, CDD, Compare to cluster

CHORISMUTPREPHENDEHYDROG-MONOMER fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12)
PFams: CM_2, PDH
373 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 6 104-105 amino acids (not heteromeric)

P9WIC1 Intracellular chorismate mutase; CM; EC 5.4.99.5
P9WIC1 Chorismate mutase (EC 5.4.99.5)
PFams: CM_2
105 amino acids: PaperBLAST, CDD, Compare to cluster

A0R3N5 Intracellular chorismate mutase; CM; EC 5.4.99.5
PFams: CM_2
104 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 7 275-286 amino acids (not heteromeric)

B6C761 Chorismate mutase (EC 5.4.99.5)
PFams: CM_2
286 amino acids: PaperBLAST, CDD, Compare to cluster

Q3LUE0 Chorismate mutase (EC 5.4.99.5)
PFams: CM_2
275 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 8 591-620 amino acids (not heteromeric)

O30012 prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); Chorismate mutase (EC 5.4.99.5)
PFams: PDH, CM_2, PDT, ACT
620 amino acids: PaperBLAST, CDD, Compare to cluster

Q74NC4 prephenate dehydratase (EC 4.2.1.51) (from HMM only)
PFams: PDH, CM_2, PDT, ACT
591 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 9 122-127 amino acids (not heteromeric)

Q84FH6 Chorismate mutase AroH; EC 5.4.99.5
Q84FH6 Chorismate mutase (EC 5.4.99.5)
PFams: CM_1
122 amino acids: PaperBLAST, CDD, Compare to cluster

P19080 Chorismate mutase AroH; CM; EC 5.4.99.5
PFams: CM_1
127 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/4 heteromeric)

A8AAX2 prephenate dehydrogenase (NADP+) (EC 1.3.1.13) (from HMM only)
PFams: CM_2, Rossmann-like, F420_oxidored, NAD_binding_2, PDH
348 amino acids: PaperBLAST, CDD

Q51507 Isochorismate pyruvate lyase; IPL; Chorismate mutase; CM; Salicylate biosynthesis protein; EC 4.2.99.21; EC 5.4.99.5
Q51507 isochorismate lyase (EC 4.2.99.21)
MONOMER-15305 isochorismate pyruvate lyase (EC 4.2.99.21)
PFams: CM_2
101 amino acids: PaperBLAST, CDD

P9WFX1 Salicylate synthase; Chorismate mutase; CM; Isochorismate synthase/isochorismate lyase; Mycobactin synthase protein; EC 5.4.99.5; EC 4.2.99.21; EC 5.4.4.2
PFams: Chorismate_bind
450 amino acids: PaperBLAST, CDD

Q57696 Chorismate mutase; CM; Monofunctional chorismate mutase AroQ(f); EC 5.4.99.5
PFams: CM_2
99 amino acids: PaperBLAST, CDD