Clusters of Characterized Proteins

GapMind for Amino acid biosynthesis

Clusters of Characterized Proteins

Clustering the characterized proteins for argD (N-acetylornithine aminotransferase) in L-proline biosynthesis

Or see other characterized proteins similar to argD

Or see all steps for L-proline biosynthesis

Or cluster curated proteins matching a keyword

Definition of argD

Curated proteins or TIGRFams with EC 2.6.1.11
Ignore hits to items matching EC 2.6.1.81 when looking for 'other' hits
Comment: This aminotransferase for converting N-acetylglutamate semialdehyde to acetylornithine is often similar to succinylornithine transaminases (EC 2.6.1.81)

Fetched 12 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 12 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 387-460 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

A8J933 acetylornithine transaminase (EC 2.6.1.11)
PFams: Aminotran_3
460 amino acids: PaperBLAST, CDD, Compare to cluster

O30508 Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81
O30508 succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD, Compare to cluster

SUCCORNTRANSAM-MONOMER succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11)
P77581 Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81
SUCCORNTRANSAM-MONOMER succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11)
CH_002469 succinylornithine transaminase; EC 2.6.1.81
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD, Compare to cluster

CH_124889 acetylornithine aminotransferase; EC 2.6.1.11
PFams: Aminotran_3
441 amino acids: PaperBLAST, CDD, Compare to cluster

ACETYLORNTRANSAM-MONOMER N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (EC 2.6.1.11; EC 2.6.1.17)
P18335 Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17
ACETYLORNTRANSAM-MONOMER N-acetylornithine aminotransferase / N-succinyldiaminopimelate aminotransferase (EC 2.6.1.11; EC 2.6.1.17)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD, Compare to cluster

P18544 Acetylornithine aminotransferase, mitochondrial; ACOAT; EC 2.6.1.11
PFams: Aminotran_3
423 amino acids: PaperBLAST, CDD, Compare to cluster

GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.11)
P22256 4-aminobutyrate aminotransferase GabT; (S)-3-amino-2-methylpropionate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.22
GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase (EC 2.6.1.19; EC 2.6.1.11)
PFams: Aminotran_3
426 amino acids: PaperBLAST, CDD, Compare to cluster

P40732 Acetylornithine/succinyldiaminopimelate aminotransferase; ACOAT; DapATase; Succinyldiaminopimelate transferase; EC 2.6.1.11; EC 2.6.1.17
PFams: Aminotran_3, Aminotran_1_2
405 amino acids: PaperBLAST, CDD, Compare to cluster

Q9M8M7 Acetylornithine aminotransferase, chloroplastic/mitochondrial; ACOAT; Acetylornithine transaminase; AOTA; Protein HOPW1-1-INTERACTING 1; EC 2.6.1.11
PFams: Aminotran_3
457 amino acids: PaperBLAST, CDD, Compare to cluster

MONOMER-18314 [LysW]-aminoadipate semialdehyde/glutamate semialdehyde transaminase (EC 2.6.1.11)
PFams: Aminotran_3
387 amino acids: PaperBLAST, CDD, Compare to cluster

Marino:GFF3099 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
PFams: Aminotran_3
404 amino acids: PaperBLAST, CDD, Compare to cluster

azobra:AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
PFams: Aminotran_3
389 amino acids: PaperBLAST, CDD, Compare to cluster