GapMind for Amino acid biosynthesis

 

Other Characterized Proteins Similar to argD

Finding the characterized proteins for argD (N-acetylornithine aminotransferase) in L-proline biosynthesis

Or see clustering for step argD

Or see all steps for L-proline biosynthesis

Or cluster curated proteins matching a keyword

Definition of argD

Fetched 12 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 13 other characterized sequences. (Found 25 hits including self hits.)

Removing ignored items reduces this to 8 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for argD.)

pseudo6_N2E2:Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48)
PFams: Aminotran_3, Aminotran_1_2
425 amino acids: PaperBLAST, CDD, reanno::pseudo6_N2E2:Pf6N2E2_4013
73% identical to

GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.11)
GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase (EC 2.6.1.19; EC 2.6.1.11)
P22256 4-aminobutyrate aminotransferase GabT; (S)-3-amino-2-methylpropionate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.22
PFams: Aminotran_3
426 amino acids: PaperBLAST, CDD

pseudo3_N2E3:AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48)
PFams: Aminotran_3
425 amino acids: PaperBLAST, CDD, reanno::pseudo3_N2E3:AO353_11510
73% identical to

GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.11)
GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase (EC 2.6.1.19; EC 2.6.1.11)
P22256 4-aminobutyrate aminotransferase GabT; (S)-3-amino-2-methylpropionate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.22
PFams: Aminotran_3
426 amino acids: PaperBLAST, CDD

MONOMER-15074 5-aminovalerate aminotransferase (EC 2.6.1.48)
Q9I6M4 5-aminovalerate aminotransferase DavT; 5-aminovalerate transaminase; Delta-aminovalerate aminotransferase; EC 2.6.1.48
Q9I6M4 5-aminovalerate transaminase (EC 2.6.1.48)
PFams: Aminotran_3
426 amino acids: PaperBLAST, CDD, BRENDA::Q9I6M4
73% identical to

GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.11)
GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase (EC 2.6.1.19; EC 2.6.1.11)
P22256 4-aminobutyrate aminotransferase GabT; (S)-3-amino-2-methylpropionate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.22
PFams: Aminotran_3
426 amino acids: PaperBLAST, CDD

Q88RB9 5-aminovalerate aminotransferase DavT; 5-aminovalerate transaminase; Delta-aminovalerate aminotransferase; EC 2.6.1.48
Q88RB9 5-aminovalerate transaminase (EC 2.6.1.48)
PFams: Aminotran_3, Aminotran_1_2
425 amino acids: PaperBLAST, CDD, BRENDA::Q88RB9
73% identical to

GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.11)
GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase (EC 2.6.1.19; EC 2.6.1.11)
P22256 4-aminobutyrate aminotransferase GabT; (S)-3-amino-2-methylpropionate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.22
PFams: Aminotran_3
426 amino acids: PaperBLAST, CDD

G6646-MONOMER 4-aminobutyrate aminotransferase PuuE (EC 2.6.1.19)
G6646-MONOMER 4-aminobutyrate aminotransferase (EC 2.6.1.19)
P50457 4-aminobutyrate aminotransferase PuuE; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; EC 2.6.1.19
PFams: Aminotran_3, Aminotran_1_2
421 amino acids: PaperBLAST, CDD, SwissProt::P50457
54% identical to

GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.11)
GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase (EC 2.6.1.19; EC 2.6.1.11)
P22256 4-aminobutyrate aminotransferase GabT; (S)-3-amino-2-methylpropionate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.22
PFams: Aminotran_3
426 amino acids: PaperBLAST, CDD

Q0K2K2 4-aminobutyrate-2-oxoglutarate transaminase (EC 2.6.1.19)
PFams: Aminotran_3
423 amino acids: PaperBLAST, CDD, BRENDA::Q0K2K2
53% identical to

GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.11)
GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase (EC 2.6.1.19; EC 2.6.1.11)
P22256 4-aminobutyrate aminotransferase GabT; (S)-3-amino-2-methylpropionate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.22
PFams: Aminotran_3
426 amino acids: PaperBLAST, CDD

Q93R93 [LysW]-aminoadipate semialdehyde transaminase; EC 2.6.1.-
PFams: Aminotran_3
395 amino acids: PaperBLAST, CDD, SwissProt::Q93R93
47% identical to

MONOMER-18314 [LysW]-aminoadipate semialdehyde/glutamate semialdehyde transaminase (EC 2.6.1.11)
PFams: Aminotran_3
387 amino acids: PaperBLAST, CDD

Putida:PP_4108 2-aminoadipate transaminase (2.6.1.39)
PFams: Aminotran_3
416 amino acids: PaperBLAST, CDD, reanno::Putida:PP_4108
44% identical to

GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase GabT (EC 2.6.1.19; EC 2.6.1.11)
GABATRANSAM-MONOMER 4-aminobutyrate aminotransferase (EC 2.6.1.19; EC 2.6.1.11)
P22256 4-aminobutyrate aminotransferase GabT; (S)-3-amino-2-methylpropionate transaminase; GABA aminotransferase; GABA-AT; Gamma-amino-N-butyrate transaminase; GABA transaminase; Glutamate:succinic semialdehyde transaminase; L-AIBAT; EC 2.6.1.19; EC 2.6.1.22
PFams: Aminotran_3
426 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for argD.)

A0A140N9B6 succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD, BRENDA::A0A140N9B6
99% identical to

SUCCORNTRANSAM-MONOMER succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11)
SUCCORNTRANSAM-MONOMER succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11)
P77581 Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81
CH_002469 succinylornithine transaminase; EC 2.6.1.81
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD

Q8ZPV2 Succinylornithine transaminase; SOAT; Succinylornithine aminotransferase; EC 2.6.1.81
PFams: Aminotran_3, Aminotran_1_2
408 amino acids: PaperBLAST, CDD, SwissProt::Q8ZPV2
84% identical to

SUCCORNTRANSAM-MONOMER succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11)
SUCCORNTRANSAM-MONOMER succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11)
P77581 Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81
CH_002469 succinylornithine transaminase; EC 2.6.1.81
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD

Koxy:BWI76_RS11670 Succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3
406 amino acids: PaperBLAST, CDD, reanno::Koxy:BWI76_RS11670
82% identical to

SUCCORNTRANSAM-MONOMER succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11)
SUCCORNTRANSAM-MONOMER succinylornithine transaminase (EC 2.6.1.81; EC 2.6.1.11)
P77581 Succinylornithine transaminase; SOAT; Carbon starvation protein C; Succinylornithine aminotransferase; EC 2.6.1.81
CH_002469 succinylornithine transaminase; EC 2.6.1.81
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD

WCS417:GFF4238 Succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD, reanno::WCS417:GFF4238
79% identical to

O30508 Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81
O30508 succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD

pseudo1_N1B4:Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3
406 amino acids: PaperBLAST, CDD, reanno::pseudo1_N1B4:Pf1N1B4_3440
79% identical to

O30508 Succinylornithine transaminase/acetylornithine aminotransferase; ACOAT; SOAT; Succinylornithine aminotransferase; EC 2.6.1.11; EC 2.6.1.81
O30508 succinylornithine transaminase (EC 2.6.1.81)
PFams: Aminotran_3, Aminotran_1_2
406 amino acids: PaperBLAST, CDD