GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for cyclodeaminase (ornithine cyclodeaminase) in L-proline biosynthesis

Or see other characterized proteins similar to cyclodeaminase

Or see all steps for L-proline biosynthesis

Or cluster curated proteins matching a keyword

Definition of cyclodeaminase

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 350-356 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q88H32 Ornithine cyclodeaminase; OCD; EC 4.3.1.12
Q88H32 ornithine cyclodeaminase (EC 4.3.1.12)
PFams: OCD_Mu_crystall
350 amino acids: PaperBLAST, CDD, Compare to cluster

P09773 Ornithine cyclodeaminase; OCD; EC 4.3.1.12
MONOMER-11553 ornithine cyclodeaminase (EC 4.3.1.12)
PFams: OCD_Mu_crystall
354 amino acids: PaperBLAST, CDD, Compare to cluster

Q59701 Ornithine cyclodeaminase; OCD; EC 4.3.1.12
PFams: OCD_Mu_crystall
356 amino acids: PaperBLAST, CDD, Compare to cluster