GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for serB (phosphoserine phosphatase) in L-serine biosynthesis

Or see other characterized proteins similar to serB

Or see all steps for L-serine biosynthesis

Or search by keyword

Definition of serB

Fetched 31 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 27 of these sequences

Found 5 clusters of similar sequences. Another 7 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 194-237 amino acids (not heteromeric)

Q58989 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
Q58989 phosphoserine phosphatase (EC 3.1.3.3)
PFams: Hydrolase, Put_Phosphatase, HAD_2, HAD, Hydrolase_3
211 amino acids: PaperBLAST, CDD, Compare to cluster

B6YX36 phosphoserine phosphatase (EC 3.1.3.3)
PFams: Hydrolase, HAD
194 amino acids: PaperBLAST, CDD, Compare to cluster

Q5M819 phosphoserine phosphatase (EC 3.1.3.3)
PFams: Hydrolase, HAD
225 amino acids: PaperBLAST, CDD, Compare to cluster

Q99LS3 phosphoserine phosphatase (EC 3.1.3.3)
PFams: Hydrolase, HAD
225 amino acids: PaperBLAST, CDD, Compare to cluster

A7H590 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, Put_Phosphatase, HAD_2, HAD, Hydrolase_3
207 amino acids: PaperBLAST, CDD, Compare to cluster

B0R7U7 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, HAD, Hydrolase_3
211 amino acids: PaperBLAST, CDD, Compare to cluster

P78330 Phosphoserine phosphatase; PSP; PSPase; L-3-phosphoserine phosphatase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, HAD, UMPH-1
225 amino acids: PaperBLAST, CDD, Compare to cluster

Q12A06 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, Put_Phosphatase, HAD, Hydrolase_3
236 amino acids: PaperBLAST, CDD, Compare to cluster

Q21YU0 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, Put_Phosphatase, HAD, Hydrolase_3
237 amino acids: PaperBLAST, CDD, Compare to cluster

Q5M3B3 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, HAD, Hydrolase_3
215 amino acids: PaperBLAST, CDD, Compare to cluster

Q5QXU4 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, HAD, S6PP, Hydrolase_3
220 amino acids: PaperBLAST, CDD, Compare to cluster

Q7M7U5 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, HAD, HAD_2, Hydrolase_3
206 amino acids: PaperBLAST, CDD, Compare to cluster

Q9CHW3 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, HAD, HAD_2, Hydrolase_3
216 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 309-328 amino acids (not heteromeric)

PSERPHOSPHA-MONOMER phosphoserine phosphatase (EC 3.1.3.3)
P0AGB0 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PSERPHOSPHA-MONOMER phosphoserine phosphatase (EC 3.1.3.3)
CH_024035 phosphoserine phosphatase; EC 3.1.3.3
PFams: DUF5609, Hydrolase, HAD, Hydrolase_3
322 amino acids: PaperBLAST, CDD, Compare to cluster

P42941 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, Put_Phosphatase, HAD, Hydrolase_3
309 amino acids: PaperBLAST, CDD, Compare to cluster

Q9KPM2 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: DUF5609, Hydrolase, HAD, Hydrolase_3
328 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 203-238 amino acids (1/3 heteromeric)

D3DFG8 Phosphoserine phosphatase 1; PSP 1; PSPase 1; Metal-independent phosphoserine phosphatase 1; iPSP1; O-phosphoserine phosphohydrolase 1; EC 3.1.3.3
D3DFG8 phosphoserine phosphatase (EC 3.1.3.3)
PFams: His_Phos_1
211 amino acids: PaperBLAST, CDD, Compare to cluster

D3DFP8 Putative phosphoserine phosphatase 2; PSP 2; PSPase 2; Metal-independent phosphoserine phosphatase 2; iPSP2; O-phosphoserine phosphohydrolase 2; EC 3.1.3.3
D3DFP8 phosphoserine phosphatase (EC 3.1.3.3)
PFams: His_Phos_1
Heteromeric, 203 amino acids: PaperBLAST, CDD, Compare to cluster

F4KI56 Metal-independent phosphoserine phosphatase; iPSP; Phosphoglycerate mutase-like protein 3; EC 3.1.3.3
PFams: His_Phos_1
238 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 4 409-411 amino acids (not heteromeric)

O53289 Phosphoserine phosphatase SerB2; PSP; PSPase; O-phosphoserine phosphohydrolase; Protein-serine/threonine phosphatase; EC 3.1.3.3; EC 3.1.3.16
O53289 phosphoserine phosphatase (EC 3.1.3.3)
PFams: ACT_6, Hydrolase, HAD, S6PP, Hydrolase_3
409 amino acids: PaperBLAST, CDD, Compare to cluster

A0QJI1 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: ACT_6, Hydrolase, HAD, S6PP, Hydrolase_3
411 amino acids: PaperBLAST, CDD, Compare to cluster

Q9S281 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: ACT_6, Hydrolase, HAD, Hydrolase_3
410 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 5 205-237 amino acids (not heteromeric)

Q883R9 Phosphoserine phosphatase; PSP; PSPase; EC 3.1.3.3
PFams: Hydrolase, HAD
237 amino acids: PaperBLAST, CDD, Compare to cluster

Q9I2Y2 Phosphoserine phosphatase ThrH; PSP; PSPase; EC 3.1.3.3
PFams: Hydrolase, HAD
205 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/7 heteromeric)

O82796 Phosphoserine phosphatase, chloroplastic; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, HAD
295 amino acids: PaperBLAST, CDD
(similar to BRENDA::Q5M819 from Cluster 1, but similarity to seed sequence is below thresholds)

P9WGJ3 Phosphoserine phosphatase SerB1; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, HAD, Hydrolase_3
308 amino acids: PaperBLAST, CDD

Q9VSY6 Phosphoserine phosphatase; PSP; PSPase; O-phosphoserine phosphohydrolase; EC 3.1.3.3
PFams: Hydrolase, HAD
270 amino acids: PaperBLAST, CDD
(similar to BRENDA::Q5M819 from Cluster 1, but similarity to seed sequence is below thresholds)

A0A1R2PVY2 O-phosphoserine phosphohydrolase; EC=3.1.3.3; Phosphoserine phosphatase
295 amino acids: PaperBLAST, CDD
(similar to SwissProt::Q21YU0 from Cluster 1, but similarity to seed sequence is below thresholds)

A0A1X9ZBA8_9SPHI 2-oxoglutarate reductase; EC=1.1.1.399; EC=3.1.3.3; D-3-phosphoglycerate dehydrogenase; AltName: Full=O-phosphoserine phosphohydrolase
433 amino acids: PaperBLAST, CDD

L0G228_ECHVK 2-oxoglutarate reductase; EC=1.1.1.399; EC=1.1.1.95; EC=3.1.3.3; D-3-phosphoglycerate dehydrogenase; AltName: Full=O-phosphoserine phosphohydrolase
630 amino acids: PaperBLAST, CDD

Q9K8N3 BH2972 protein
276 amino acids: PaperBLAST, CDD