GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for serC (3-phosphoserine aminotransferase) in L-serine biosynthesis

Or see other characterized proteins similar to serC

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Definition of serC

Fetched 14 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 12 of these sequences

Found 2 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 361-430 amino acids (not heteromeric)

Q59196 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52
Q59196 phosphoserine transaminase (EC 2.6.1.52)
PFams: Aminotran_5
362 amino acids: PaperBLAST, CDD, Compare to cluster

Q9RME2 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52
Q9RME2 phosphoserine transaminase (EC 2.6.1.52)
PFams: Aminotran_5
361 amino acids: PaperBLAST, CDD, Compare to cluster

Q9Y617 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52
Q9Y617 glycine transaminase (EC 2.6.1.4); phosphoserine transaminase (EC 2.6.1.52)
PFams: Aminotran_5
370 amino acids: PaperBLAST, CDD, Compare to cluster

V9NC98 phosphoserine transaminase (EC 2.6.1.52)
PFams: Aminotran_5
394 amino acids: PaperBLAST, CDD, Compare to cluster

PSERTRANSAM-MONOMER phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17)
P23721 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52
CH_002572 phosphoserine aminotransferase; EC 2.6.1.52
PFams: Aminotran_5
362 amino acids: PaperBLAST, CDD, Compare to cluster

P10658 Phosphoserine aminotransferase; PSAT; Endometrial progesterone-induced protein; EPIP; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52
PFams: Aminotran_5
370 amino acids: PaperBLAST, CDD, Compare to cluster

P33330 Phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52
PFams: Aminotran_5
395 amino acids: PaperBLAST, CDD, Compare to cluster

Q96255 Phosphoserine aminotransferase 1, chloroplastic; AtPSAT1; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52
AT4G35630-MONOMER phosphoserine aminotransferase (EC 2.6.1.52)
PFams: Aminotran_5
430 amino acids: PaperBLAST, CDD, Compare to cluster

Q9SHP0 Phosphoserine aminotransferase 2, chloroplastic; AtPSAT2; EC 2.6.1.52
PFams: Aminotran_5
422 amino acids: PaperBLAST, CDD, Compare to cluster

Q9VAN0 Probable phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52
PFams: Aminotran_5
364 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 384-385 amino acids (not heteromeric)

P74281 phosphoserine transaminase (EC 2.6.1.52)
PFams: Aminotran_5, Cys_Met_Meta_PP
384 amino acids: PaperBLAST, CDD, Compare to cluster

Y959_METJA Uncharacterized aminotransferase MJ0959; EC=2.6.1.-
385 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

P52878 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52
P52878 phosphoserine transaminase (EC 2.6.1.52)
PFams: Aminotran_5
370 amino acids: PaperBLAST, CDD

P9WQ73 Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52
P9WQ73 phosphoserine transaminase (EC 2.6.1.52)
PFams: Aminotran_5
376 amino acids: PaperBLAST, CDD