GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for trpD_1 (glutamine amidotransferase of anthranilate synthase) in L-tryptophan biosynthesis

Or see other characterized proteins similar to trpD_1

Or see all steps for L-tryptophan biosynthesis

Or cluster curated proteins matching a keyword

Definition of trpD_1

Fetched 17 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 15 of these sequences

Found 2 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 188-209 amino acids (6/12 heteromeric)

P09786 Anthranilate synthase component 2, pyocyanine specific; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27
P09786 anthranilate synthase (subunit 1/2) (EC 4.1.3.27)
PFams: GATase, Peptidase_C26
Heteromeric, 200 amino acids: PaperBLAST, CDD, Compare to cluster

MONOMER-3604 anthranilate synthase β subunit (EC 4.1.3.27)
Q06129 Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27
Q06129 anthranilate synthase (subunit 1/2) (EC 4.1.3.27)
PFams: GATase, Peptidase_C26
Heteromeric, 195 amino acids: PaperBLAST, CDD, Compare to cluster

CH_008350 anthranilate synthase component II; EC 4.1.3.27
PFams: GATase, Peptidase_C26
201 amino acids: PaperBLAST, CDD, Compare to cluster

P00900 Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27
PFams: GATase, Peptidase_C26
Heteromeric, 193 amino acids: PaperBLAST, CDD, Compare to cluster

P00901 Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27
PFams: GATase, Peptidase_C26
Heteromeric, 198 amino acids: PaperBLAST, CDD, Compare to cluster

P20576 Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27
PFams: GATase, Peptidase_C26
Heteromeric, 201 amino acids: PaperBLAST, CDD, Compare to cluster

P26922 Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27
PFams: GATase, Peptidase_C26
Heteromeric, 196 amino acids: PaperBLAST, CDD, Compare to cluster

P28819 Aminodeoxychorismate/anthranilate synthase component 2; ADC synthase; ADCS; 4-amino-4-deoxychorismate synthase component 2; Aminodeoxychorismate synthase, glutamine amidotransferase component; EC 2.6.1.85; EC 4.1.3.27
PFams: GATase, Peptidase_C26
194 amino acids: PaperBLAST, CDD, Compare to cluster

A0A1X9ZDE4_9SPHI Aminodeoxychorismate/anthranilate synthase component II
198 amino acids: PaperBLAST, CDD, Compare to cluster

B8DM46_DESVM Glutamine amidotransferase of anthranilate synthase
192 amino acids: PaperBLAST, CDD, Compare to cluster

Q72EV2_DESVH Anthranilate synthase, glutamine amidotransferase component; EC=4.1.3.27
209 amino acids: PaperBLAST, CDD, Compare to cluster

Q8AAD4_BACTN Anthranilate synthase component II
188 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 273-288 amino acids (heteromeric)

Q7XUS2 Anthranilate synthase beta subunit 1, chloroplastic; OsASB1; Anthranilate synthase, glutamine amidotransferase component 2-1; EC 4.1.3.27
PFams: GATase, Peptidase_C26
Heteromeric, 288 amino acids: PaperBLAST, CDD, Compare to cluster

Q42565 Anthranilate synthase beta subunit 1, chloroplastic; Anthranilate synthase component 2-1; Anthranilate synthase, glutamine amidotransferase component 2-1; Protein TRYPTOPHAN BIOSYNTHESIS 4; Protein WEAK ETHYLENE INSENSITIVE 7; EC 4.1.3.27
PFams: GATase, Peptidase_C26
Heteromeric, 276 amino acids: PaperBLAST, CDD, Compare to cluster

Q764B9 Anthranilate synthase beta subunit 2, chloroplastic; OsASB2; Anthranilate synthase, glutamine amidotransferase component 2-2; EC 4.1.3.27
PFams: GATase, Peptidase_C26
Heteromeric, 273 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (1/2 heteromeric)

CH_122586 anthranilate synthase component 2; EC 4.1.3.27
PFams: GATase, IGPS, PRAI
768 amino acids: PaperBLAST, CDD

ANTHRANSYNCOMPII-MONOMER anthranilate synthase subunit TrpD (EC 2.4.2.18; EC 4.1.3.27)
ANTHRANSYNCOMPII-MONOMER anthranilate synthase component II (EC 2.4.2.18)
P00904 Bifunctional protein TrpGD; EC 4.1.3.27; EC 2.4.2.18
PFams: GATase, Peptidase_C26, Glycos_trans_3N, Glycos_transf_3
Heteromeric, 531 amino acids: PaperBLAST, CDD