Other Characterized Proteins Similar to trpD_2

Finding the characterized proteins for trpD_2 (anthranilate phosphoribosyltransferase) in L-tryptophan biosynthesis

Or see clustering for step trpD_2

Or see all steps for L-tryptophan biosynthesis

Or cluster curated proteins matching a keyword

Definition of trpD_2

• Curated proteins or TIGRFams with EC 2.4.2.18
• Ignore hits to items matching EC 4.1.3.27 when looking for 'other' hits
• Comment: Often fused to anthranilate synthase so ignore that (i.e., P00500 is labeled in BRENDA as a subunit of anthranilate synthase; it is probably anthranilate phosphoribosyltransferase as well)

Fetched 11 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 12 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for trpD_2.)

P00500 anthranilate synthase (subunit 1/2) (EC 4.1.3.27) from Serratia marcescens
PFams: Glycos_trans_3N, Glycos_transf_3
Heteromeric, 349 amino acids: PaperBLAST, CDD, BRENDA::P00500
43% identical to

TRPD_XANCP / Q8PD71 Anthranilate phosphoribosyltransferase; EC 2.4.2.18 from Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
PFams: Glycos_trans_3N, Glycos_transf_3
345 amino acids: PaperBLAST, CDD