GapMind for Amino acid biosynthesis

 

Other Characterized Proteins Similar to aro-dehydr

Finding the characterized proteins for aro-dehydr (arogenate dehydrogenase) in L-tyrosine biosynthesis

Or see clustering for step aro-dehydr

Or see all steps for L-tyrosine biosynthesis

Or cluster curated proteins matching a keyword

Definition of aro-dehydr

Fetched 9 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 6 other characterized sequences. (Found 12 hits including self hits.)

Removing ignored items reduces this to 1 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for aro-dehydr.)

B6SS03 arogenate dehydrogenase [NAD(P)+] (EC 1.3.1.79) from Zea mays
PFams: F420_oxidored, PDH_N
349 amino acids: PaperBLAST, CDD, BRENDA::B6SS03
87% identical to

B4FY98 arogenate dehydrogenase 1 (EC 1.3.1.43) from Zea mays
PFams: F420_oxidored, NAD_binding_2, PDH_N
360 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for aro-dehydr.)

Ga0059261_2298 prephenate and/or arogenate dehydrogenase (EC 1.3.1.13) from Sphingomonas koreensis DSMZ 15582
PFams: IlvN, F420_oxidored, NAD_binding_2, PDH_N
249 amino acids: PaperBLAST, CDD, reanno::Korea:Ga0059261_2298
100% identical to

A0A1L6J750 Prephenate dehydrogenase
249 amino acids: PaperBLAST, CDD

BT3933 prephenate dehydrogenase (EC 1.3.1.13) from Bacteroides thetaiotaomicron VPI-5482
PFams: PDH_N
257 amino acids: PaperBLAST, CDD, reanno::Btheta:353459
100% identical to

Q8A0T8_BACTN Chorismate mutase/prephenate dehydratase (TyrA)
257 amino acids: PaperBLAST, CDD

G7J2E9 prephenate dehydrogenase (NADP+) (EC 1.3.1.13) from Medicago truncatula
PFams: F420_oxidored, PDH_N
268 amino acids: PaperBLAST, CDD, BRENDA::G7J2E9
50% identical to

Q9LMR3 arogenate dehydrogenase (EC 1.3.1.78) from Arabidopsis thaliana
TYRA2_ARATH / Q9LMR3 Arogenate dehydrogenase 2, chloroplastic; TyrAAT2; EC 1.3.1.78 from Arabidopsis thaliana (Mouse-ear cress)
Q9LMR3 arogenate dehydrogenase (NADP+) (EC 1.3.1.78) from Arabidopsis thaliana
PFams: F420_oxidored, PDH_N
358 amino acids: PaperBLAST, CDD

O67636 prephenate dehydrogenase (EC 1.3.1.12) from Aquifex aeolicus
PFams: NAD_binding_2, PDH_N, PDH_C
311 amino acids: PaperBLAST, CDD, BRENDA::O67636
40% identical to

D8IR44_HERSS Prephenate dehydrogenase protein; EC=1.3.1.12
295 amino acids: PaperBLAST, CDD

J9XQS6 prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium
PFams: PDH_N, PDH_C
287 amino acids: PaperBLAST, CDD, BRENDA::J9XQS6
41% identical to

TYRC_ZYMMO / Q04983 Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
PFams: 2-Hacid_dh_C, IlvN, F420_oxidored, NAD_binding_2, PDH_N, PDH_C
293 amino acids: PaperBLAST, CDD