GapMind for Amino acid biosynthesis

 

Clusters of Characterized Proteins

Clustering the characterized proteins for ilvD ((R)-2,3-dihydroxy-3-methylbutanoate dehydratase) in L-valine biosynthesis

Or see other characterized proteins similar to ilvD

Or see all steps for L-valine biosynthesis

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Definition of ilvD

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 557-617 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q8NQZ9 dihydroxy-acid dehydratase (EC 4.2.1.9)
PFams: ILVD_EDD
613 amino acids: PaperBLAST, CDD, Compare to cluster

Q97UB2 dihydroxy-acid dehydratase (EC 4.2.1.9)
PFams: ILVD_EDD
558 amino acids: PaperBLAST, CDD, Compare to cluster

DIHYDROXYACIDDEHYDRAT-MONOMER dihydroxy-acid dehydratase (EC 4.2.1.9)
P05791 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9
CH_024768 dihydroxyacid dehydratase
PFams: ILVD_EDD
616 amino acids: PaperBLAST, CDD, Compare to cluster

P39522 Dihydroxy-acid dehydratase, mitochondrial; DAD; 2,3-dihydroxy acid hydrolyase; EC 4.2.1.9
PFams: ILVD_EDD
585 amino acids: PaperBLAST, CDD, Compare to cluster

P55186 Dihydroxy-acid dehydratase; DAD; EC 4.2.1.9
PFams: ILVD_EDD
617 amino acids: PaperBLAST, CDD, Compare to cluster

MONOMER-18815 dihydroxyacid dehydratase (EC 4.2.1.9)
PFams: ILVD_EDD
557 amino acids: PaperBLAST, CDD, Compare to cluster