PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 3-isopropylmalate dehydratase large subunit as complete word(s)

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Found 6 characterized proteins with matching descriptions. 5 of these are heteromeric.

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 466-509 amino acids (heteromeric)

The first sequence in each cluster is the seed.

LEUC-MONOMER 3-isopropylmalate dehydratase subunit LeuC (EC 4.2.1.33)
LEUC-MONOMER LeuC
CH_024771 3-isopropylmalate dehydratase large subunit; EC 4.2.1.33
PFams: Aconitase
Heteromeric, 466 amino acids: PaperBLAST, CDD, Compare to cluster

Q94AR8 3-isopropylmalate dehydratase large subunit, chloroplastic; AtLEUC; Isopropylmalate isomerase large subunit 1; AtIIL1; EC 4.2.1.33
Q94AR8 2-(omega-methylthio)alkylmalate dehydratase (subunit 2/2) (EC 4.2.1.170); 3-isopropylmalate dehydratase (EC 4.2.1.33)
PFams: Aconitase
Heteromeric, 509 amino acids: PaperBLAST, CDD, Compare to cluster

P15717 3-isopropylmalate dehydratase large subunit 1; Alpha-IPM isomerase 1; IPMI 1; Isopropylmalate isomerase 1; EC 4.2.1.33
PFams: Aconitase
Heteromeric, 466 amino acids: PaperBLAST, CDD, Compare to cluster

P58946 3-isopropylmalate dehydratase large subunit; Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase; EC 4.2.1.33
PFams: Aconitase
Heteromeric, 481 amino acids: PaperBLAST, CDD, Compare to cluster

Q7TXH6 3-isopropylmalate dehydratase large subunit; Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase; EC 4.2.1.33
PFams: Aconitase
Heteromeric, 473 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

S3E7P8 3-isopropylmalate dehydratase large subunit gloJ; L-homotyrosine biosynthesis sub-cluster protein gloJ; Pneumocandin biosynthesis cluster protein J; EC 4.2.1.33
PFams: Aconitase, Aconitase_C
880 amino acids: PaperBLAST, CDD