PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for acetohydroxy-acid synthase%small as complete word(s)

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Found 6 characterized proteins with matching descriptions. 2 of these are heteromeric.

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 6 of these sequences

Found 3 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 289-309 amino acids (not heteromeric)

ILV6_SCHPO / O60086 Probable acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
PFams: ACT, ACT_5, ALS_ss_C
289 amino acids: PaperBLAST, CDD, Compare to cluster

ILV6_YEAST / P25605 Acetolactate synthase small subunit, mitochondrial; Acetohydroxy-acid synthase small subunit; AHAS; ALS from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: ACT, ACT_5, ALS_ss_C
309 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 2 168-169 amino acids (heteromeric)

ILVH_MYCTU / P9WKJ3 Putative acetolactate synthase small subunit; Acetohydroxy-acid synthase small subunit; AHAS; ALS; EC 2.2.1.6 from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WKJ3 acetolactate synthase (subunit 1/2) (EC 2.2.1.6) from Mycobacterium tuberculosis
PFams: ACT, ACT_5, ALS_ss_C
Heteromeric, 168 amino acids: PaperBLAST, CDD, Compare to cluster

O08354 acetohydroxy-acid synthase small subunit (EC 2.2.1.6) from Methanococcus aeolicus
PFams: ACT, ACT_5, ALS_ss_C
Heteromeric, 169 amino acids: PaperBLAST, CDD, Compare to cluster

Cluster 3 449-477 amino acids (not heteromeric)

ILVH2_ARATH / Q9FFF4 Acetolactate synthase small subunit 2, chloroplastic; ALS-interacting protein 3; Acetohydroxy-acid synthase small subunit 2; Protein valine-tolerant 1 from Arabidopsis thaliana (Mouse-ear cress)
PFams: ACT, ACT_5, ALS_ss_C, ACT, ACT_5, ALS_ss_C
477 amino acids: PaperBLAST, CDD, Compare to cluster

ILVH_NICPL / Q9SMC2 Acetolactate synthase small subunit 1, chloroplastic; Acetohydroxy-acid synthase small subunit; AHAS; ALS from Nicotiana plumbaginifolia (Leadwort-leaved tobacco) (Tex-Mex tobacco)
PFams: ACT_5, ACT, ALS_ss_C, ACT, ACT_5, ALS_ss_C
449 amino acids: PaperBLAST, CDD, Compare to cluster