PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for carbamoyl-phosphate synthetase%large as complete word(s)

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Found 2 characterized proteins with matching descriptions. 2 of these are heteromeric.

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 1071-1073 amino acids (heteromeric)

The first sequence in each cluster is the seed.

b0033 carbamoyl phosphate synthetase subunit β (EC 6.3.5.5) from Escherichia coli K-12 substr. MG1655
P00968 carbamoyl-phosphate synthetase large subunit (EC 6.3.5.5) from Escherichia coli (strain K12)
P00968 carbamoyl-phosphate synthase (glutamine-hydrolysing) (EC 6.3.5.5) from Escherichia coli
CH_002132 carbamoyl phosphate synthase, large subunit; EC 6.3.5.5 from Escherichia coli
PFams: CPSase_L_D2, CPSase_L_D3, CPSase_L_D2, ATP-grasp_3, ATP-grasp, Dala_Dala_lig_C, MGS
Heteromeric, 1073 amino acids: PaperBLAST, CDD, Compare to cluster

P25994 pyrimidine-specific carbamoyl-phosphate synthetase (large subunit) (EC 6.3.5.5) from Bacillus subtilis (strain 168)
CARB_BACSU / P25994 Carbamoyl-phosphate synthase pyrimidine-specific large chain; Carbamoyl-phosphate synthetase ammonia chain; EC 6.3.5.5 from Bacillus subtilis (strain 168)
PFams: CPSase_L_D2, ATP-grasp, Dala_Dala_lig_C, CPSase_L_D3, ATP-grasp_3, CPSase_L_D2, GARS_A, ATP-grasp, Dala_Dala_lig_C, ATPgrasp_Ter, MGS
Heteromeric, 1071 amino acids: PaperBLAST, CDD, Compare to cluster