PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for homoaconitase small subunit as complete word(s)

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Found 2 characterized proteins with matching descriptions. 2 of these are heteromeric.

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 163-170 amino acids (heteromeric)

The first sequence in each cluster is the seed.

Q58667 Methanogen homoaconitase small subunit; HACN; Homoaconitate hydratase; EC 4.2.1.114
PFams: Aconitase_2_N, Aconitase_C
Heteromeric, 170 amino acids: PaperBLAST, CDD, Compare to cluster

Q9ZND9 Homoaconitase small subunit; HACN; Homoaconitate hydratase; EC 4.2.1.36
PFams: Aconitase_C
Heteromeric, 163 amino acids: PaperBLAST, CDD, Compare to cluster