PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for propionate--CoA ligase as complete word(s)

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Found 4 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 628-629 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

P55912 Propionate--CoA ligase; Propionyl-CoA synthetase; EC 6.2.1.17
MONOMER-62 propionate-CoA ligase (EC 6.2.1.17)
PFams: ACAS_N, AMP-binding, AMP-binding_C
628 amino acids: PaperBLAST, CDD, Compare to cluster

Phaeo:GFF1175 Propionate--CoA ligase (EC 6.2.1.17)
PFams: ACAS_N, AMP-binding, AMP-binding_C
629 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/2 heteromeric)

A4YDR9 4-hydroxybutyrate--CoA ligase 2; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; acyl-activating enzyme; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17
A4YDR9 4-hydroxybutyrate-CoA ligase (EC 6.2.1.40)
PFams: AMP-binding, AMP-binding_C
549 amino acids: PaperBLAST, CDD

A4YDT1 4-hydroxybutyrate--CoA ligase 1; Acetate--CoA ligase; Butyrate--CoA ligase; Propionate--CoA ligase; EC 6.2.1.40; EC 6.2.1.1; EC 6.2.1.2; EC 6.2.1.17
A4YDT1 4-hydroxybutyrate-CoA ligase (EC 6.2.1.40)
MONOMER-13735 4-hydroxybutyryl-CoA synthetase (AMP-forming) (EC 6.2.1.40)
PFams: AMP-binding, AMP-binding_C
564 amino acids: PaperBLAST, CDD