PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.4.2.3 as complete word(s)

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Found 19 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 19 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 17 of these sequences

Found 3 clusters of similar sequences. Another 2 sequences are not clustered. Download as table or as draft rules or view by cluster

Aeropyrum pernix

Q9YA34 uridine phosphorylase (EC 2.4.2.3) from Aeropyrum pernix
PFams: PNP_UDP_1
282 amino acids: PaperBLAST, CDD (Cluster 1)

Escherichia coli

b4382 thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli K-12 substr. MG1655
P07650 thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli (strain K12)
P07650 thymidine phosphorylase (EC 2.4.2.4) from Escherichia coli
GB|AAC77335.1 thymidine phosphorylase; EC 2.4.2.4 from Escherichia coli K12
PFams: Glycos_trans_3N, Glycos_transf_3, PYNP_C
440 amino acids: PaperBLAST, CDD (Cluster 3)

b3831 uridine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli K-12 substr. MG1655
P12758 uridine phosphorylase (EC 2.4.2.2) from Escherichia coli (strain K12)
CH_003939 uridine phosphorylase; EC 2.4.2.3 from Escherichia coli K12
PFams: PNP_UDP_1
253 amino acids: PaperBLAST, CDD (Cluster 1)

b0391 nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli K-12 substr. MG1655
P0C037 nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.2; EC 2.4.2.1) from Escherichia coli (strain K12)
PPNP_ECOLI / P0C037 Pyrimidine/purine nucleoside phosphorylase; Adenosine phosphorylase; Cytidine phosphorylase; Guanosine phosphorylase; Inosine phosphorylase; Thymidine phosphorylase; Uridine phosphorylase; Xanthosine phosphorylase; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.15; EC 2.4.2.4; EC 2.4.2.3 from Escherichia coli (strain K12)
PFams: Ppnp
94 amino acids: PaperBLAST, CDD (Singleton 2)

Geobacillus stearothermophilus

P77836 pyrimidine-nucleoside phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Geobacillus stearothermophilus
PDP_GEOSE / P77836 Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Geobacillus stearothermophilus (Bacillus stearothermophilus)
GB|BAA13512.1 pyrimidine-nucleoside phosphorylase; EC 2.4.2.2 from Geobacillus stearothermophilus
PFams: Glycos_trans_3N, Glycos_transf_3, PYNP_C
433 amino acids: PaperBLAST, CDD (Cluster 3)

Homo sapiens

P19971 thymidine phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Homo sapiens
TYPH_HUMAN / P19971 Thymidine phosphorylase; TP; Gliostatin; Platelet-derived endothelial cell growth factor; PD-ECGF; TdRPase; EC 2.4.2.4 from Homo sapiens (Human)
P19971 thymidine phosphorylase (EC 2.4.2.4) from Homo sapiens
PFams: Glycos_trans_3N, Glycos_transf_3, PYNP_C
482 amino acids: PaperBLAST, CDD (Cluster 3)

Q16831 uridine phosphorylase 1 (EC 2.4.2.3; EC 2.4.2.2) from Homo sapiens
UPP1_HUMAN / Q16831 Uridine phosphorylase 1; UPase 1; UrdPase 1; EC 2.4.2.3 from Homo sapiens (Human)
Q16831 uridine phosphorylase (EC 2.4.2.3) from Homo sapiens
PFams: PNP_UDP_1
310 amino acids: PaperBLAST, CDD (Cluster 2)

UPP2_HUMAN / O95045 Uridine phosphorylase 2; UPase 2; UrdPase 2; EC 2.4.2.3 from Homo sapiens (Human)
O95045 uridine phosphorylase (EC 2.4.2.3) from Homo sapiens
PFams: PNP_UDP_1
317 amino acids: PaperBLAST, CDD (Cluster 2)

Klebsiella michiganensis

BWI76_RS01295 Uridine phosphorylase (EC 2.4.2.3) from Klebsiella michiganensis M5al
PFams: PNP_UDP_1
253 amino acids: PaperBLAST, CDD (Cluster 1)

Mus musculus

UPP1_MOUSE / P52624 Uridine phosphorylase 1; UPase 1; UrdPase 1; EC 2.4.2.3 from Mus musculus (Mouse)
PFams: PNP_UDP_1
311 amino acids: PaperBLAST, CDD (Cluster 2)

Plasmodium falciparum

Q8T9Z7 purine nucleoside phosphorylase monomer (EC 2.4.2.44; EC 2.4.2.1) from Plasmodium falciparum
Q8I3X4 purine-nucleoside phosphorylase (EC 2.4.2.1); uridine phosphorylase (EC 2.4.2.3) from Plasmodium falciparum
Q8T9Z7 purine-nucleoside phosphorylase (EC 2.4.2.1) from Plasmodium falciparum
PFams: PNP_UDP_1
245 amino acids: PaperBLAST, CDD (Cluster 1)

Rattus norvegicus

Q499V1 uridine phosphorylase (EC 2.4.2.3) from Rattus norvegicus
PFams: PNP_UDP_1
312 amino acids: PaperBLAST, CDD (Cluster 2)

Salmonella enterica

P0A1F6 uridine phosphorylase (EC 2.4.2.3) from Salmonella enterica subsp. enterica serovar Typhimurium
PFams: PNP_UDP_1
253 amino acids: PaperBLAST, CDD (Cluster 1)

Schistosoma mansoni

G4VGH9 uridine phosphorylase (EC 2.4.2.3) from Schistosoma mansoni
PFams: PNP_UDP_1
296 amino acids: PaperBLAST, CDD (Cluster 2)

Shewanella ANA-3

Shewana3_3680 Uridine phosphorylase (EC 2.4.2.3) from Shewanella sp. ANA-3
PFams: PNP_UDP_1
252 amino acids: PaperBLAST, CDD (Cluster 1)

Shewanella amazonensis

Sama_0412 Uridine phosphorylase (EC 2.4.2.3) from Shewanella amazonensis SB2B
PFams: PNP_UDP_1
252 amino acids: PaperBLAST, CDD (Cluster 1)

Shewanella oneidensis

SO4133 Uridine phosphorylase (EC 2.4.2.3) from Shewanella oneidensis MR-1
C7EWM3 uridine phosphorylase (EC 2.4.2.3) from Shewanella oneidensis
PFams: PNP_UDP_1
252 amino acids: PaperBLAST, CDD (Cluster 1)

Trypanosoma brucei

Q57VZ2 uridine phosphorylase (EC 2.4.2.3) from Trypanosoma brucei
PFams: PNP_UDP_1
341 amino acids: PaperBLAST, CDD (Singleton 1)

Vibrio cholerae

Q9K4U1 uridine phosphorylase (EC 2.4.2.3) from Vibrio cholerae
PFams: PNP_UDP_1
253 amino acids: PaperBLAST, CDD (Cluster 1)