PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 2.7.1.178

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Found 8 characterized proteins with matching descriptions. 0 of these are heteromeric.

Fetched 8 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 2 clusters of similar sequences. Another 3 sequences are not clustered. Download as table or as draft rules or view by cluster

Dickeya dadantii

KDGK_DICD3 / P45416 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Dickeya dadantii (strain 3937) (Erwinia chrysanthemi (strain 3937))
P45416 2-dehydro-3-deoxy-D-gluconate kinase (EC 2.7.1.178) from Dickeya dadantii (strain 3937)
PFams: PfkB
310 amino acids: PaperBLAST, CDD (Cluster 2)

Escherichia coli

b3526 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli K-12 substr. MG1655
KDGK_ECOLI / P37647 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Escherichia coli (strain K12)
P37647 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178) from Escherichia coli (strain K12)
PFams: PfkB
309 amino acids: PaperBLAST, CDD (Cluster 2)

b3693 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178; EC 2.7.1.58) from Escherichia coli K-12 substr. MG1655
P31459 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178) from Escherichia coli (strain K12)
PFams: DGOK
292 amino acids: PaperBLAST, CDD (Singleton 3)

Haloferax volcanii

D4GR05 6-phosphofructokinase (EC 2.7.1.11); 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) from Haloferax volcanii
PFams: PfkB
318 amino acids: PaperBLAST, CDD (Cluster 1)

D4GSE6 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Haloferax volcanii
PFams: PfkB
320 amino acids: PaperBLAST, CDD (Cluster 1)

Saccharolobus solfataricus

KDGK_SACS2 / Q97U29 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxy-galactonokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; KDGal kinase; EC 2.7.1.178 from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (Sulfolobus solfataricus)
Q97U29 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178) from Saccharolobus solfataricus
Q97U29 2-dehydro-3-deoxyglucono/2-dehydro-3-deoxygalactonokinase monomer (EC 2.7.1.178) from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
PFams: PfkB
313 amino acids: PaperBLAST, CDD (Singleton 1)

Q9ZU29 2-dehydro-3-deoxyglucono/galactono-kinase (EC 2.7.1.178) from Saccharolobus solfataricus
PFams: PPR_3, PPR_2, PPR, PPR_long, PPR_3, PPR_1, PPR_2, PPR, PPR_2, PPR, PPR_3, PPR_2, PPR, PPR_3, PPR, PPR_2, PPR_3, PPR
577 amino acids: PaperBLAST, CDD (Singleton 2)

Thermotoga maritima

Q9WXS2 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Thermotoga maritima
Q9WXS2 2-keto-3-deoxygluconate kinase (EC 2.7.1.178) from Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
PFams: PfkB
339 amino acids: PaperBLAST, CDD (Cluster 1)