GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for Psest_0084 (2-oxoglutarate TRAP transporter, fused 4TM/12TM components) in 2-oxoglutarate (alpha-ketoglutarate) catabolism

Or see other characterized proteins similar to Psest_0084

Or see all steps for 2-oxoglutarate (alpha-ketoglutarate) catabolism

Or cluster curated proteins matching a keyword

Definition of Psest_0084

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Organism unknown

A8LI82 TRAP transporter
743 amino acids: PaperBLAST, CDD (Cluster 1)

E4PQE4 TRAP transporter, 4TM/12TM fusion protein
729 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas stutzeri

Psest_0084 alpha-ketoglutarate TRAP transporter, 4TM/12TM components from Pseudomonas stutzeri RCH2
PFams: DctM, DctM
Heteromeric, 674 amino acids: PaperBLAST, CDD (Cluster 1)