GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for boxD (3,4-dehydroadipyl-CoA semialdehyde dehydrogenase) in 4-hydroxybenzoate catabolism

Or see other characterized proteins similar to boxD

Or see all steps for 4-hydroxybenzoate catabolism

Or cluster curated proteins matching a keyword

Definition of boxD

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 515-531 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q13WK4 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase (NADP+) (EC from Paraburkholderia xenovorans
PFams: Aldedh
531 amino acids: PaperBLAST, CDD, Compare to cluster

Q84HH8 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase monomer (EC from Azoarcus evansii
BOXD_AZOEV / Q84HH8 3,4-dehydroadipyl-CoA semialdehyde dehydrogenase; EC from Azoarcus evansii
PFams: Aldedh
515 amino acids: PaperBLAST, CDD, Compare to cluster