GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for hcrB (4-hydroxybenzoyl-CoA reductase, beta subunit) in 4-hydroxybenzoate catabolism

Or see other characterized proteins similar to hcrB

Or see all steps for 4-hydroxybenzoate catabolism

Or cluster curated proteins matching a keyword

Definition of hcrB

Fetched 3 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 3 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 324-329 amino acids (heteromeric)

The first sequence in each cluster is the seed.

O33820 4-hydroxybenzoyl-CoA reductase β subunit (EC from Thauera aromatica
HCRB_THAAR / O33820 4-hydroxybenzoyl-CoA reductase subunit beta; 4-HBCR subunit beta; EC from Thauera aromatica
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 324 amino acids: PaperBLAST, CDD, Compare to cluster

Q5P3F4 4-hydroxybenzoyl-CoA reductase, β subunit (EC from Aromatoleum aromaticum (strain EbN1)
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 329 amino acids: PaperBLAST, CDD, Compare to cluster

G3XCQ8 4-hydroxybenzoyl-CoA reductase HbaD subunit (EC from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 327 amino acids: PaperBLAST, CDD, Compare to cluster