Finding the characterized proteins for ligB (protocatechuate 4,5-dioxygenase, beta subunit) in 4-hydroxybenzoate catabolism
Or see clustering for step ligB
Or see all steps for 4-hydroxybenzoate catabolism
Or cluster curated proteins matching a keyword
Definition of ligB
Fetched 3 sequences
Running ublast to find other characterized proteins with 40% identity and 70% coverage
Found hits to 2 other characterized sequences. (Found 5 hits including self hits.)
(Sequences that are similar to these will not be high-confidence candidates for ligB.)
Q5NTE5 gallate dioxygenase monomer (EC 1.13.11.57) from Sphingomonas paucimobilis
G2IKE5 gallate dioxygenase (EC 1.13.11.57) from Sphingobium sp. SYK-6
Q5NTE5 gallate dioxygenase (EC 1.13.11.57) from Sphingomonas paucimobilis
PFams: LigB, LigA
418 amino acids: PaperBLAST, CDD, BRENDA::G2IKE5
41% identical to
Q8RNX9 protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni
PFams: LigB
Heteromeric, 289 amino acids: PaperBLAST, CDD
Q88JX5 gallate dioxygenase monomer (EC 1.13.11.57) from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
GALA_PSEPK / Q88JX5 Gallate dioxygenase; Gallate degradation protein A; EC 1.13.11.57 from Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)
PFams: LigB, LigA
340 amino acids: PaperBLAST, CDD, SwissProt::Q88JX5
43% identical to
Q8RNX9 protocatechuate 4,5-dioxygenase β subunit (EC 1.13.11.8; EC 1.13.11.57) from Comamonas testosteroni
PFams: LigB
Heteromeric, 289 amino acids: PaperBLAST, CDD