GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to paaF

Finding the characterized proteins for paaF (2,3-dehydroadipyl-CoA hydratase) in 4-hydroxybenzoate catabolism

Or see clustering for step paaF

Or see all steps for 4-hydroxybenzoate catabolism

Or cluster curated proteins matching a keyword

Definition of paaF

Fetched 4 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 12 other characterized sequences. (Found 15 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for paaF.)

Psest_2437 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) from Pseudomonas stutzeri RCH2
PFams: ECH_1, ECH_2
257 amino acids: PaperBLAST, CDD, reanno::psRCH2:GFF2389
64% identical to

A0A2Z5MEB0 Enoyl-CoA hydratase
258 amino acids: PaperBLAST, CDD

O07453 BadK from Rhodopseudomonas palustris
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD, metacyc::MONOMER-943
64% identical to

BPHYT_RS17335 trans-2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans PsJN
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD

C8YX87 AcuK from Halomonas sp. HTNK1
PFams: ECH_1, ECH_2
253 amino acids: PaperBLAST, CDD, metacyc::MONOMER-15200
60% identical to

BPHYT_RS17335 trans-2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans PsJN
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD

Q58DM8 short chain enoyl-CoA hydratase subunit (EC 4.2.1.17) from Bos taurus
PFams: ECH_1, ECH_2
290 amino acids: PaperBLAST, CDD, metacyc::MONOMER-11697
56% identical to

BPHYT_RS17335 trans-2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans PsJN
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD

ECHM_RAT / P14604 Enoyl-CoA hydratase, mitochondrial; Enoyl-CoA hydratase 1; Short-chain enoyl-CoA hydratase; SCEH; EC 4.2.1.17 from Rattus norvegicus (Rat)
P14604 enoyl-CoA hydratase (EC 4.2.1.17); DELTA3,5-DELTA2,4-dienoyl-CoA isomerase (EC 5.3.3.21) from Rattus norvegicus
PFams: ECH_1, ECH_2
290 amino acids: PaperBLAST, CDD, BRENDA::P14604
56% identical to

BPHYT_RS17335 trans-2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans PsJN
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD

ECHM_HUMAN / P30084 Enoyl-CoA hydratase, mitochondrial; Enoyl-CoA hydratase 1; Short-chain enoyl-CoA hydratase; SCEH; EC 4.2.1.17 from Homo sapiens (Human)
P30084 enoyl-CoA hydratase (EC 4.2.1.17) from Homo sapiens
P30084 mitochondrial enoyl-CoA hydratase (EC 4.2.1.17) from Homo sapiens
PFams: ECH_1, ECH_2
290 amino acids: PaperBLAST, CDD, BRENDA::P30084
55% identical to

BPHYT_RS17335 trans-2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans PsJN
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD

CH_121974 mitochondrial enoyl-CoA hydratase from Emericella nidulans
PFams: ECH_1, ECH_2
289 amino acids: PaperBLAST, CDD, CharProtDB::CH_121974
52% identical to

BPHYT_RS17335 trans-2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans PsJN
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD

A5N5C7 crotonase (EC 4.2.1.150) from Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
PFams: ECH_1, ECH_2
259 amino acids: PaperBLAST, CDD, metacyc::MONOMER-13469
46% identical to

BPHYT_RS17335 trans-2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans PsJN
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD

CRT_CLOAB / P52046 Short-chain-enoyl-CoA hydratase; 3-hydroxybutyryl-CoA dehydratase; Crotonase; EC 4.2.1.150 from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
P52046 crotonase monomer (EC 4.2.1.150) from Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
CH_091794 3-hydroxybutyryl-CoA dehydratase; EC 4.2.1.55 from Clostridium acetobutylicum
PFams: ECH_1, ECH_2
261 amino acids: PaperBLAST, CDD, CharProtDB::CH_091794
46% identical to

Q845K2 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas sp. Y2
PFams: ECH_1, ECH_2
257 amino acids: PaperBLAST, CDD

CRCH_SYNWW / Q0AVM1 Crotonyl-CoA hydratase; EC 4.2.1.150 from Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen)
PFams: ECH_1, ECH_2
260 amino acids: PaperBLAST, CDD, SwissProt::Q0AVM1
44% identical to

BPHYT_RS17335 trans-2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans PsJN
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD

HPCD_METS5 / A4YI89 3-hydroxypropionyl-coenzyme A dehydratase; 3-hydroxypropionyl-CoA dehydratase; EC 4.2.1.116 from Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)
A4YI89 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula
A4YI89 3-hydroxypropionyl-CoA dehydratase (EC 4.2.1.116) from Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)
PFams: ECH_1, ECH_2
259 amino acids: PaperBLAST, CDD, BRENDA::A4YI89
42% identical to

BPHYT_RS17335 trans-2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Burkholderia phytofirmans PsJN
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD

FADB_BACSU / P94549 Probable enoyl-CoA hydratase; EC 4.2.1.17 from Bacillus subtilis (strain 168)
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD, SwissProt::P94549
40% identical to

Q845K2 2,3-dehydroadipyl-CoA hydratase (EC 4.2.1.17) from Pseudomonas sp. Y2
PFams: ECH_1, ECH_2
257 amino acids: PaperBLAST, CDD