GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for paaF (2,3-dehydroadipyl-CoA hydratase) in 4-hydroxybenzoate catabolism

Or see other characterized proteins similar to paaF

Or see all steps for 4-hydroxybenzoate catabolism

Or cluster curated proteins matching a keyword

Definition of paaF

Fetched 4 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 4 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Burkholderia phytofirmans

BPHYT_RS17335 trans-2,3-dehydroadipyl-CoA hydratase (EC from Burkholderia phytofirmans PsJN
PFams: ECH_1, ECH_2
258 amino acids: PaperBLAST, CDD (Cluster 1)

Escherichia coli

PAAF_ECOLI / P76082 2,3-dehydroadipyl-CoA hydratase; Enoyl-CoA hydratase; EC from Escherichia coli (strain K12)
P76082 enoyl-CoA hydratase (EC from Escherichia coli
PFams: ECH_1, ECH_2
255 amino acids: PaperBLAST, CDD (Cluster 1)

Organism unknown

A0A2Z5MEB0 Enoyl-CoA hydratase
258 amino acids: PaperBLAST, CDD (Cluster 1)

Pseudomonas Y2

Q845K2 2,3-dehydroadipyl-CoA hydratase (EC from Pseudomonas sp. Y2
PFams: ECH_1, ECH_2
257 amino acids: PaperBLAST, CDD (Cluster 1)