GapMind for catabolism of small carbon sources


Other Characterized Proteins Similar to pcaB

Finding the characterized proteins for pcaB (3-carboxymuconate cycloisomerase) in 4-hydroxybenzoate catabolism

Or see clustering for step pcaB

Or see all steps for 4-hydroxybenzoate catabolism

Or cluster curated proteins matching a keyword

Definition of pcaB

Fetched 3 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 3 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for pcaB.)

A0A0U2UYC4 trans-aconitate decarboxylase (EC from Ustilago maydis
TAD1_USTMD / A0A0U2UYC4 Trans-aconitate decarboxylase 1; Itaconic acid/2-hydroxyparaconate biosynthesis cluster protein TAD1 from Ustilago maydis (Corn smut fungus)
PFams: Lyase_1, ADSL_C
493 amino acids: PaperBLAST, CDD, SwissProt::A0A0U2UYC4
40% identical to

A0A0C4YE08 3-carboxy-cis,cis-muconate cycloisomerase; EC=
470 amino acids: PaperBLAST, CDD