GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for pimC (pimeloyl-CoA dehydrogenase, small subunit) in 4-hydroxybenzoate catabolism

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Definition of pimC

Fetched 1 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 0 of these sequences

Found 0 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by cluster

Rhodopseudomonas palustris

Q6N3I1 pimeloyl-CoA dehydrogenase small subunit (EC from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
PFams: Acyl-CoA_dh_N, Acyl-CoA_dh_M, Acyl-CoA_dh_1
Heteromeric, 380 amino acids: PaperBLAST, CDD (Singleton 1)