GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to xylF

Finding the characterized proteins for xylF (2-hydroxymuconate semialdehyde hydrolase) in 4-hydroxybenzoate catabolism

Or see clustering for step xylF

Or see all steps for 4-hydroxybenzoate catabolism

Or cluster curated proteins matching a keyword

Definition of xylF

Fetched 2 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 3 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for xylF.)

TODF_PSEP1 / P23133 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; HOHH; EC 3.7.1.25 from Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1)
P23133 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (EC 3.7.1.25) from Pseudomonas putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1)
PFams: Abhydrolase_1, Abhydrolase_6, Hydrolase_4
276 amino acids: PaperBLAST, CDD, SwissProt::P23133
66% identical to

G3KFX4 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp.
PFams: Abhydrolase_1, Abhydrolase_6, Hydrolase_4
282 amino acids: PaperBLAST, CDD