Finding the characterized proteins for Pf6N2E2_5404 (ABC transporter for D-Alanine, permease component 1) in D-alanine catabolism
Or see clustering for step Pf6N2E2_5404
Or see all steps for D-alanine catabolism
Or cluster curated proteins matching a keyword
Definition of Pf6N2E2_5404
Fetched 1 sequences
Running ublast to find other characterized proteins with 40% identity and 70% coverage
Found hits to 3 other characterized sequences. (Found 4 hits including self hits.)
(Sequences that are similar to these will not be high-confidence candidates for Pf6N2E2_5404.)
TC 3.A.1.3.8 / Q52814 AapM, component of General L-amino acid porter; transports basic and acidic amino acids preferentially, but also transports aliphatic amino acids (catalyzes both uptake and efflux) from Rhizobium leguminosarum (biovar viciae)
PFams: BPD_transp_1
Heteromeric, 384 amino acids: PaperBLAST, CDD, TCDB::Q52814
54% identical to
Pf6N2E2_5404 ABC transporter for D-Alanine, permease component 1 from Pseudomonas fluorescens FW300-N2E2
PFams: BPD_transp_1
Heteromeric, 365 amino acids: PaperBLAST, CDD
SMc02120 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, permease component 2 from Sinorhizobium meliloti 1021
PFams: BPD_transp_1
Heteromeric, 384 amino acids: PaperBLAST, CDD, reanno::Smeli:SMc02120
55% identical to
Pf6N2E2_5404 ABC transporter for D-Alanine, permease component 1 from Pseudomonas fluorescens FW300-N2E2
PFams: BPD_transp_1
Heteromeric, 365 amino acids: PaperBLAST, CDD
TC 3.A.1.3.7 / Q52665 BztC, component of Glutamate/glutamine/aspartate/asparagine porter from Rhodobacter capsulatus (Rhodopseudomonas capsulata)
PFams: BPD_transp_1
Heteromeric, 434 amino acids: PaperBLAST, CDD, TCDB::Q52665
49% identical to
Pf6N2E2_5404 ABC transporter for D-Alanine, permease component 1 from Pseudomonas fluorescens FW300-N2E2
PFams: BPD_transp_1
Heteromeric, 365 amino acids: PaperBLAST, CDD