GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for glcE (D-lactate dehydrogenase, FAD-linked subunit 2 (GlcE)) in D-lactate catabolism

Or see other characterized proteins similar to glcE

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Definition of glcE

Fetched 5 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 350-405 amino acids (heteromeric)

The first sequence in each cluster is the seed.

b4468 glycolate dehydrogenase, putative FAD-binding subunit (EC 1.1.99.14) from Escherichia coli K-12 substr. MG1655
GLCE_ECOLI / P52073 Glycolate oxidase subunit GlcE; Glycolate dehydrogenase subunit GlcE; EC 1.1.99.14 from Escherichia coli (strain K12)
P52073 glycolate dehydrogenase, putative FAD-binding subunit (EC 1.1.99.14) from Escherichia coli (strain K12)
RF|YP_026191.1 glycolate oxidase, subunit glcE from Escherichia coli K12
PFams: FAD_binding_4
Heteromeric, 350 amino acids: PaperBLAST, CDD, Compare to cluster

RR42_RS17310 D-lactate oxidase, FAD binding subunit (EC 1.1.3.15) from Cupriavidus basilensis 4G11
PFams: FAD_binding_4
Heteromeric, 374 amino acids: PaperBLAST, CDD, Compare to cluster

PGA1_c29710 D-lactate oxidase, FAD binding subunit (EC 1.1.3.15) from Phaeobacter inhibens BS107
PFams: FAD_binding_4
Heteromeric, 366 amino acids: PaperBLAST, CDD, Compare to cluster

SMc00833 D-lactate oxidase, FAD binding subunit (EC 1.1.3.15) from Sinorhizobium meliloti 1021
PFams: FAD_binding_4
Heteromeric, 405 amino acids: PaperBLAST, CDD, Compare to cluster

Psest_3840 D-lactate oxidase and glycolate oxidase, FAD binding subunit (EC 1.1.3.15) from Pseudomonas stutzeri RCH2
PFams: FAD_binding_4, FAD-oxidase_C
Heteromeric, 353 amino acids: PaperBLAST, CDD, Compare to cluster