Other Characterized Proteins Similar to dsdA

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to dsdA

Finding the characterized proteins for dsdA (D-serine ammonia-lyase) in D-serine catabolism

Or see clustering for step dsdA

Or see all steps for D-serine catabolism

Or cluster curated proteins matching a keyword

Definition of dsdA

Curated proteins or TIGRFams with EC 4.3.1.18

Fetched 17 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 13 other characterized sequences. (Found 30 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for dsdA.)

F5CAQ9 serine racemase (EC 5.1.1.18) from Zea mays
PFams: PALP
338 amino acids: PaperBLAST, CDD, BRENDA::F5CAQ9
89% identical to

SRR_ORYSJ / Q7XSN8 Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Oryza sativa subsp. japonica (Rice)
Q7XSN8 serine racemase (EC 5.1.1.18) from Oryza sativa
PFams: PALP
339 amino acids: PaperBLAST, CDD

A5HUN0 serine racemase (EC 5.1.1.18) from Hordeum vulgare
A5HUN0 serine racemase (EC 5.1.1.18) from Hordeum vulgare
PFams: PALP
337 amino acids: PaperBLAST, CDD, metacyc::MONOMER-14687
88% identical to

LTHAD_YEAST / P36007 L-threo-3-hydroxyaspartate ammonia-lyase; L-threo-3-hydroxyaspartate dehydratase; EC 4.3.1.16 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
PFams: PALP
326 amino acids: PaperBLAST, CDD, SwissProt::P36007
66% identical to

SRR_SCHPO / O59791 Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
O59791 serine racemase (EC 5.1.1.18) from Schizosaccharomyces pombe
PFams: PALP
323 amino acids: PaperBLAST, CDD

L0N5C4 threo-3-hydroxy-L-aspartate ammonia-lyase (EC 4.3.1.16) from Pseudomonas sp. N99
PFams: PALP
321 amino acids: PaperBLAST, CDD, BRENDA::L0N5C4
64% identical to

A4F2N8 L-threo-3-hydroxy aspartate ammonia-lyase (EC 4.3.1.16) from Pseudomonas sp.
LTHAD_PSESP / A4F2N8 L-threo-3-hydroxyaspartate ammonia-lyase; L-threo-3-hydroxyaspartate dehydratase; L-THA DH; EC 4.3.1.16 from Pseudomonas sp.
A4F2N8 threo-3-hydroxy-L-aspartate ammonia-lyase (EC 4.3.1.16) from Pseudomonas sp. T62
PFams: PALP
319 amino acids: PaperBLAST, CDD, SwissProt::A4F2N8
64% identical to

BHCB_PARDP / A1B8Z2 beta-hydroxyaspartate dehydratase; EC 4.2.1.- from Paracoccus denitrificans (strain Pd 1222)
PFams: PALP
315 amino acids: PaperBLAST, CDD, SwissProt::A1B8Z2
50% identical to

Q2PGG3 serine racemase (EC 5.1.1.18) from Arabidopsis thaliana
SRR_ARATH / Q2PGG3 Serine racemase; AtSR; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 4.3.1.17; EC 4.3.1.18; EC 5.1.1.18 from Arabidopsis thaliana (Mouse-ear cress)
Q2PGG3 serine racemase (EC 5.1.1.18) from Arabidopsis thaliana
PFams: PALP
331 amino acids: PaperBLAST, CDD

F7ZG00 serine racemase (EC 5.1.1.18) from Roseobacter litoralis
PFams: PALP
323 amino acids: PaperBLAST, CDD, BRENDA::F7ZG00
49% identical to

A0A0U5AKI6 serine racemase (EC 5.1.1.18) from Crassostrea gigas
PFams: PALP
326 amino acids: PaperBLAST, CDD, BRENDA::A0A0U5AKI6
46% identical to

SRR_RAT / Q76EQ0 Serine racemase; D-serine ammonia-lyase; D-serine dehydratase; L-serine ammonia-lyase; L-serine dehydratase; EC 5.1.1.18; EC 4.3.1.18; EC 4.3.1.17 from Rattus norvegicus (Rat)
Q76EQ0 serine racemase (EC 5.1.1.18) from Rattus norvegicus
PFams: PALP
333 amino acids: PaperBLAST, CDD

K1QH67 aspartate racemase (EC 5.1.1.13) from Crassostrea gigas
PFams: PALP
330 amino acids: PaperBLAST, CDD, BRENDA::K1QH67
45% identical to

A0A0U4MRI4 serine racemase (EC 5.1.1.18) from Penaeus monodon
PFams: PALP
330 amino acids: PaperBLAST, CDD, BRENDA::A0A0U4MRI4
45% identical to

Q54HH2 D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum
PFams: PALP
324 amino acids: PaperBLAST, CDD

A0A0U5A554 aspartate racemase (EC 5.1.1.13) from Penaeus monodon
PFams: PALP
334 amino acids: PaperBLAST, CDD, BRENDA::A0A0U5A554
42% identical to

Q54HH2 D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum
PFams: PALP
324 amino acids: PaperBLAST, CDD

A0QY48 L-serine ammonia-lyase (EC 4.3.1.17) from Mycolicibacterium smegmatis
PFams: PALP
316 amino acids: PaperBLAST, CDD, BRENDA::A0QY48
40% identical to

Q54HH2 D-Serine ammonia-lyase (EC 4.3.1.18) from Dictyostelium discoideum
PFams: PALP
324 amino acids: PaperBLAST, CDD

b1919 D-cysteine desulfhydrase (EC 4.4.1.15; EC 4.5.1.2) from Escherichia coli K-12 substr. MG1655
P76316 D-cysteine desulfhydrase (EC 4.4.1.15; EC 4.5.1.2) from Escherichia coli (strain K12)
DCYD_ECOLI / P76316 D-cysteine desulfhydrase; EC 4.4.1.15 from Escherichia coli (strain K12)
RF|NP_416429 D-cysteine desulfhydrase; EC 4.4.1.15 from Escherichia coli K12
PFams: PALP
328 amino acids: PaperBLAST, CDD, CharProtDB::CH_003017
41% identical to

O57809 L-serine ammonia-lyase (EC 4.3.1.17); D-Serine ammonia-lyase (EC 4.3.1.18) from Pyrococcus horikoshii
PFams: PALP
325 amino acids: PaperBLAST, CDD