Other Characterized Proteins Similar to Shew_2731

Finding the characterized proteins for Shew_2731 (L-lactate:Na+ symporter, large component) in L-lactate catabolism

Or see clustering for step Shew_2731

Or see all steps for L-lactate catabolism

Or cluster curated proteins matching a keyword

Definition of Shew_2731

• Curated sequence 5209923: actP-like component of L-lactate and L-malate uptake system
• Ignore hits to 6937353 when looking for 'other' hits (actP-like component of lactate uptake system)
• Comment: 2-component L-lactate transporter from Shewanella loihica PV-4. A related system in Shewanella amazonesnsis SB2B is also probably a L-lactate transporter (SB2B cannot utilize D-lactate), but its specificity is not proven, so it is marked ignore.

Fetched 1 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 2 other characterized sequences. (Found 3 hits including self hits.)

Removing ignored items reduces this to 1 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for Shew_2731.)

Psest_0347 actP-like component of D-alanine uptake system from Pseudomonas stutzeri RCH2
PFams: SSF, SSF
Heteromeric, 589 amino acids: PaperBLAST, CDD, reanno::psRCH2:GFF346
57% identical to

Shew_2371 actP-like component of L-lactate and L-malate uptake system from Shewanella loihica PV-4
PFams: SSF, SSF
Heteromeric, 572 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for Shew_2731.)

Sama_1523 actP-like component of lactate uptake system from Shewanella amazonensis SB2B
PFams: SSF, SSF
Heteromeric, 572 amino acids: PaperBLAST, CDD, reanno::SB2B:6937353
89% identical to

Shew_2371 actP-like component of L-lactate and L-malate uptake system from Shewanella loihica PV-4
PFams: SSF, SSF
Heteromeric, 572 amino acids: PaperBLAST, CDD