Other Characterized Proteins Similar to dctP

Finding the characterized proteins for dctP (L-malate TRAP transporter, substrate-binding component DctP) in L-malate catabolism

Or see clustering for step dctP

Or see all steps for L-malate catabolism

Or cluster curated proteins matching a keyword

Definition of dctP

• Curated sequence A3QCW5: C4-dicarboxylate-binding periplasmic protein DctP. dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component
• Curated sequence P37735: C4-dicarboxylate-binding periplasmic protein DctP. DctP, component of Tripartite dicarboxylate:H+ symporter (substrates include: fumarate, D- and L-malate, succinate, succinamide, orotate, iticonate and mesaconate)
• Curated sequence Q9KQR9: C4-dicarboxylate-binding periplasmic protein DctP
• Curated sequence Q9HU18: C4-dicarboxylate-binding periplasmic protein DctP
• UniProt sequence I7END8: SubName: Full=C4-dicarboxylate-binding periplasmic protein DctP {ECO:0000313|EMBL:AFO91753.1};
• Ignore hits to 6938088 when looking for 'other' hits (alpha-ketoglutarate TRAP transporter, solute receptor component)
• UniProt sequence Q9HVH5: SubName: Full=Probable c4-dicarboxylate-binding protein {ECO:0000313|EMBL:AAG08004.1};
• Curated sequence 5208945: C4-dicarboxylate-binding periplasmic protein DctP. dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component
• Comment: Q9HVH5 = PA4616 is a malate-binding substrate-binding protein (PMC4310620)

Fetched 6 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 2 other characterized sequences. (Found 6 hits including self hits.)

Removing ignored items reduces this to 1 close sequences.

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for dctP.)

DCTB_BACSU / P96600 C4-dicarboxylate-binding protein DctB from Bacillus subtilis (strain 168)
PFams: DctP
350 amino acids: PaperBLAST, CDD, SwissProt::P96600
41% identical to

DCTP_RHOCA / P37735 C4-dicarboxylate-binding periplasmic protein DctP from Rhodobacter capsulatus (Rhodopseudomonas capsulata)
TC 2.A.56.1.1 / P37735 DctP, component of Tripartite dicarboxylate:H+ symporter (substrates include: fumarate, D- and L-malate, succinate, succinamide, orotate, iticonate and mesaconate) from Rhodobacter capsulatus (Rhodopseudomonas capsulata)
PFams: DctP
Heteromeric, 333 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for dctP.)

Sama_2209 alpha-ketoglutarate TRAP transporter, solute receptor component from Shewanella amazonensis SB2B
PFams: DctP
Heteromeric, 339 amino acids: PaperBLAST, CDD, reanno::SB2B:6938088
79% identical to

Shew_1446 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component from Shewanella loihica PV-4
DCTP_SHELP / A3QCW5 C4-dicarboxylate-binding periplasmic protein DctP from Shewanella loihica (strain ATCC BAA-1088 / PV-4)
PFams: DctP
Heteromeric, 336 amino acids: PaperBLAST, CDD