Other Characterized Proteins Similar to dctQ

Finding the characterized proteins for dctQ (L-malate TRAP tranpsorter, small permease component DctQ) in L-malate catabolism

Or see clustering for step dctQ

Or see all steps for L-malate catabolism

Or cluster curated proteins matching a keyword

Definition of dctQ

• Curated sequence O07837: C4-dicarboxylate TRAP transporter small permease protein DctQ. DctQ, component of Tripartite dicarboxylate:H+ symporter (substrates include: fumarate, D- and L-malate, succinate, succinamide, orotate, iticonate and mesaconate)
• Curated sequence 5208944: dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component
• UniProt sequence I7EY26: SubName: Full=TRAP transporter, subunit DctQ {ECO:0000313|EMBL:AFO91752.1};
• Ignore hits to 6938089 when looking for 'other' hits (alpha-ketoglutarate TRAP transporter, small permease component)

Fetched 3 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 3 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for dctQ.)

Sama_2210 alpha-ketoglutarate TRAP transporter, small permease component from Shewanella amazonensis SB2B
PFams: DctQ
Heteromeric, 213 amino acids: PaperBLAST, CDD, reanno::SB2B:6938089
66% identical to

Shew_1445 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component from Shewanella loihica PV-4
PFams: DctQ
Heteromeric, 212 amino acids: PaperBLAST, CDD