GapMind for catabolism of small carbon sources

 

Clusters of Characterized Proteins

Clustering the characterized proteins for nagA (N-acetylglucosamine 6-phosphate deacetylase) in N-acetyl-D-glucosamine catabolism

Or see other characterized proteins similar to nagA

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Definition of nagA

Fetched 28 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 28 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 367-413 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

Q8Y8E8 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Listeria monocytogenes
PFams: Amidohydro_1
377 amino acids: PaperBLAST, CDD, Compare to cluster

Q8DN83 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Streptococcus pneumoniae
PFams: Amidohydro_1
383 amino acids: PaperBLAST, CDD, Compare to cluster

Q8Y5F6 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Listeria monocytogenes
PFams: Amidohydro_1
377 amino acids: PaperBLAST, CDD, Compare to cluster

AAC44683.1 N-acetylglucosamine 6-phosphate deacetylase (EC 3.5.1.25) (see protein)
PFams: Amidohydro_1
399 amino acids: PaperBLAST, CDD, Compare to cluster

b0677 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli K-12 substr. MG1655
NAGA_ECOLI / P0AF18 N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Escherichia coli (strain K12)
NAGA_ECO57 / P0AF19 N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Escherichia coli O157:H7
P0AF18 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli (strain K12)
AAC73771.1 N-acetylglucosamine 6-phosphate deacetylase (NagA;b0677) (EC 3.5.1.25) (see protein)
AAG54999.1 EDL933_0745 (EC 3.5.1.25) (see protein)
BAB34130.1 ECs0707 (EC 3.5.1.25) (see protein)
MB|P0AF18 GlcNAc 6-P deacetylase from Escherichia coli K12
PFams: Amidohydro_1
382 amino acids: PaperBLAST, CDD, Compare to cluster

AAF81087.1 N-acetylgalactosamine 6-phosphate deacetylase (AgaA) (EC 3.5.1.-) (from HMM only) (see protein)
PFams: Amidohydro_1
384 amino acids: PaperBLAST, CDD, Compare to cluster

AAN79225.1 c0752 (NagA) (EC 3.5.1.25) (see protein)
PFams: Amidohydro_1
382 amino acids: PaperBLAST, CDD, Compare to cluster

BAA22834.1 N-acetylglucosamine 6-phosphate deacetylase (NagA) (EC 3.5.1.25) (see protein)
PFams: Amidohydro_1
378 amino acids: PaperBLAST, CDD, Compare to cluster

BAB43820.1 N-acetyl-glucosamine-6-phosphate deacetylase (Dac1;Nag2) (EC 3.5.1.25) (see protein)
PFams: Amidohydro_1, Amidohydro_3
413 amino acids: PaperBLAST, CDD, Compare to cluster

NAGA_BACSU / O34450 N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Bacillus subtilis (strain 168)
CAB15506.1 N-acetylglucosamine 6-phosphate deacetylase (NagA;BSU35010) (EC 3.5.1.25) (see protein)
PFams: Amidohydro_1
396 amino acids: PaperBLAST, CDD, Compare to cluster

AGAA2_SHESA / A0KYQ5 N-acetylgalactosamine-6-phosphate deacetylase; GalNAc-6-P deacetylase; N-acetylglucosamine-6-phosphate deacetylase; GlcNAc-6-P deacetylase; EC 3.5.1.-; EC 3.5.1.25 from Shewanella sp. (strain ANA-3)
A0KYQ5 N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp. (strain ANA-3)
PFams: Amidohydro_1
394 amino acids: PaperBLAST, CDD, Compare to cluster

NAGA_VIBCH / O32445 N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
O32445 N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
PFams: Amidohydro_1
378 amino acids: PaperBLAST, CDD, Compare to cluster

NAGA_LYSSH / Q84F86 N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Lysinibacillus sphaericus (Bacillus sphaericus)
PFams: Amidohydro_1
387 amino acids: PaperBLAST, CDD, Compare to cluster

NAGA_MOUSE / Q8JZV7 N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; Amidohydrolase domain-containing protein 2; EC 3.5.1.25 from Mus musculus (Mouse)
PFams: Amidohydro_1, Amidohydro_3
409 amino acids: PaperBLAST, CDD, Compare to cluster

AGAA_ECO57 / Q8XAC3 N-acetylgalactosamine-6-phosphate deacetylase; Aga-6-P deacetylase; EC 3.5.1.- from Escherichia coli O157:H7
Q8XAC3 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Escherichia coli O157:H7
PFams: Amidohydro_1
377 amino acids: PaperBLAST, CDD, Compare to cluster

NAGA_HUMAN / Q9Y303 N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; Amidohydrolase domain-containing protein 2; EC 3.5.1.25 from Homo sapiens (Human)
PFams: Amidohydro_1, Amidohydro_3
409 amino acids: PaperBLAST, CDD, Compare to cluster

A3CQ16 N-acetylglucosamine-6-phosphate deacetylase subunit (EC 3.5.1.25) from Streptococcus sanguinis (strain SK36)
PFams: Amidohydro_1
383 amino acids: PaperBLAST, CDD, Compare to cluster

Shewana3_3112 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp. ANA-3
PFams: Amidohydro_1
378 amino acids: PaperBLAST, CDD, Compare to cluster

BPHYT_RS02730 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Burkholderia phytofirmans PsJN
PFams: Amidohydro_1
367 amino acids: PaperBLAST, CDD, Compare to cluster

CCNA_00452 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Caulobacter crescentus NA1000
PFams: Amidohydro_1
378 amino acids: PaperBLAST, CDD, Compare to cluster

Ga0059261_1645 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Sphingomonas koreensis DSMZ 15582
PFams: Amidohydro_1
386 amino acids: PaperBLAST, CDD, Compare to cluster

SO3505 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella oneidensis MR-1
PFams: Amidohydro_1, Amidohydro_3
378 amino acids: PaperBLAST, CDD, Compare to cluster

Shew_1117 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella loihica PV-4
PFams: Amidohydro_1
376 amino acids: PaperBLAST, CDD, Compare to cluster

Sama_0946 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis SB2B
PFams: Amidohydro_1
377 amino acids: PaperBLAST, CDD, Compare to cluster

PS417_22985 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas simiae WCS417
PFams: Amidohydro_1
368 amino acids: PaperBLAST, CDD, Compare to cluster

PfGW456L13_4830 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens GW456-L13
PFams: Amidohydro_1
368 amino acids: PaperBLAST, CDD, Compare to cluster

AO353_04450 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens FW300-N2E3
PFams: Amidohydro_1
368 amino acids: PaperBLAST, CDD, Compare to cluster

AO356_17550 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Pseudomonas fluorescens FW300-N2C3
PFams: Amidohydro_1
368 amino acids: PaperBLAST, CDD, Compare to cluster