GapMind for catabolism of small carbon sources


Other Characterized Proteins Similar to nagA

Finding the characterized proteins for nagA (N-acetylglucosamine 6-phosphate deacetylase) in N-acetyl-D-glucosamine catabolism

Or see clustering for step nagA

Or see all steps for N-acetyl-D-glucosamine catabolism

Or cluster curated proteins matching a keyword

Definition of nagA

Fetched 28 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 1 other characterized sequences. (Found 29 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

There are also 1 HMM-only high-coverage hits.

HMM-only sequences

(Since these sequences' annotations are outside the definition for nagA, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)

AAF81087.1 N-acetylgalactosamine 6-phosphate deacetylase (AgaA) (EC 3.5.1.-) (see protein)
PFams: Amidohydro_1
384 amino acids: PaperBLAST, CDD

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for nagA.)

CH_123434 predicted N-acetylglucosamine-6-phosphate deacetylase from Candida albicans
PFams: Amidohydro_1, Amidohydro_3
413 amino acids: PaperBLAST, CDD, CharProtDB::CH_123434
99% identical to

BAB43820.1 N-acetyl-glucosamine-6-phosphate deacetylase (Dac1;Nag2) (EC (see protein)
PFams: Amidohydro_1, Amidohydro_3
413 amino acids: PaperBLAST, CDD