Finding the characterized proteins for nagA (N-acetylglucosamine 6-phosphate deacetylase) in N-acetyl-D-glucosamine catabolism
Or see clustering for step nagA
Or see all steps for N-acetyl-D-glucosamine catabolism
Or cluster curated proteins matching a keyword
Definition of nagA
Fetched 28 sequences
Running ublast to find other characterized proteins with 40% identity and 70% coverage
Found hits to 1 other characterized sequences. (Found 29 hits including self hits.)
Removing ignored items reduces this to 0 close sequences.
There are also 1 HMM-only high-coverage hits.
(Since these sequences' annotations are outside the definition for nagA, HMM hits that are over 40% similar to these sequences will be scored as moderate confidence.)
AAF81087.1 N-acetylgalactosamine 6-phosphate deacetylase (AgaA) (EC 3.5.1.-) (see protein)
PFams: Amidohydro_1
384 amino acids: PaperBLAST, CDD
(Sequences that are similar to these will still be high-confidence candidates for nagA.)
CH_123434 predicted N-acetylglucosamine-6-phosphate deacetylase from Candida albicans
PFams: Amidohydro_1, Amidohydro_3
413 amino acids: PaperBLAST, CDD, CharProtDB::CH_123434
99% identical to
BAB43820.1 N-acetyl-glucosamine-6-phosphate deacetylase (Dac1;Nag2) (EC 3.5.1.25) (see protein)
PFams: Amidohydro_1, Amidohydro_3
413 amino acids: PaperBLAST, CDD