Clusters of Characterized Proteins

Clustering the characterized proteins for patA (Acetate transporter PatA) in acetate catabolism

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Definition of patA

• Curated sequence A0A075TRL0: Acetate transporter protein patA; Patulin biosynthesis cluster protein A
• Curated sequence A1CFK8: Acetate transporter protein patA; Patulin synthesis protein A

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 247-249 amino acids (not heteromeric)

PATA_PENEN / A0A075TRL0 Acetate transporter protein patA; Patulin biosynthesis cluster protein A from Penicillium expansum (Blue mold rot fungus)
PFams: Gpr1_Fun34_YaaH
249 amino acids: PaperBLAST, CDD, Compare to cluster

PATA_ASPCL / A1CFK8 Acetate transporter protein patA; Patulin synthesis protein A from Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
PFams: Gpr1_Fun34_YaaH
247 amino acids: PaperBLAST, CDD, Compare to cluster