Other Characterized Proteins Similar to braD

GapMind for catabolism of small carbon sources

Other Characterized Proteins Similar to braD

Finding the characterized proteins for braD (L-alanine/L-serine/L-threonine ABC transporter, permease component 1 (BraD/NatD)) in L-alanine catabolism

Or see clustering for step braD

Or see all steps for L-alanine catabolism

Or cluster curated proteins matching a keyword

Definition of braD

Curated sequence P21627: High-affinity branched-chain amino acid transport system permease protein BraD, component of Branched chain amino acid uptake transporter. Transports alanine
Curated sequence P74318: NatD aka LivH aka SLR0949, component of Leucine/proline/alanine/serine/glycine (and possibly histidine) porter, NatABCDE
Curated sequence Q8YXD0: NatD, component of The neutral amino acid permease, N-1 (transports pro, phe, leu, gly, ala, ser, gln and his, but gln and his are not transported via NatB)

Fetched 3 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 3 other characterized sequences. (Found 6 hits including self hits.)

Close sequences

(Sequences that are similar to these will not be high-confidence candidates for braD.)

b3457 branched chain amino acid/phenylalanine ABC transporter membrane subunit LivH (EC 7.4.2.2) from Escherichia coli K-12 substr. MG1655
P0AEX7 branched chain amino acid/phenylalanine ABC transporter membrane subunit LivH (EC 7.4.2.2) from Escherichia coli (strain K12)
TC 3.A.1.4.1 / P0AEX7 High-affinity branched-chain amino acid transport system permease protein LivH aka B3457, component of Leucine; leucine/isoleucine/valine porter from Escherichia coli
CH_088640 high-affinity branched-chain amino acid ABC transporter, permease protein LivH from Escherichia coli K12
PFams: BPD_transp_2
Heteromeric, 308 amino acids: PaperBLAST, CDD, ecocyc::LIVH-MONOMER
66% identical to

TC 3.A.1.4.8 / P21627 High-affinity branched-chain amino acid transport system permease protein BraD, component of Branched chain amino acid uptake transporter. Transports alanine from Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
PFams: BPD_transp_2
Heteromeric, 307 amino acids: PaperBLAST, CDD

AZOBR_RS08235 L-proline and D-alanine ABC transporter, permease component 1 from Azospirillum brasilense Sp245
PFams: BPD_transp_2
Heteromeric, 301 amino acids: PaperBLAST, CDD, reanno::azobra:AZOBR_RS08235
56% identical to

TC 3.A.1.4.10 / Q8DQI0 ABC transporter membrane-spanning permease-branched chain amino acid transport, component of The branched chain hydrophobic amino acid transporter, LivJFGHM from Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
PFams: BPD_transp_2, FecCD
Heteromeric, 292 amino acids: PaperBLAST, CDD, TCDB::Q8DQI0
41% identical to