GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for KDG-aldolase (2-dehydro-3-deoxy-L-arabinonate aldolase) in L-arabinose catabolism

Or see other characterized proteins similar to KDG-aldolase

Or see all steps for L-arabinose catabolism

Or cluster curated proteins matching a keyword

Definition of KDG-aldolase

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by organism

Cluster 1 288-294 amino acids (not heteromeric)

The first sequence in each cluster is the seed.

KDGA_SULAC / Q4JC35 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Q4JC35 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6 phosphogalactonate aldolase (EC from Sulfolobus acidocaldarius
288 amino acids: PaperBLAST, CDD, Compare to cluster

O54288 KDG-aldolase subunit (EC; EC; EC from Saccharolobus solfataricus
KDGA_SACSO / O54288 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase; EC from Saccharolobus solfataricus (Sulfolobus solfataricus)
O54288 2-dehydro-3-deoxy-phosphogluconate aldolase (EC; 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6 phosphogalactonate aldolase (EC from Saccharolobus solfataricus
294 amino acids: PaperBLAST, CDD, Compare to cluster