GapMind for catabolism of small carbon sources

 

Other Characterized Proteins Similar to aldox-med

Finding the characterized proteins for aldox-med ((glycol)aldehyde oxidoreductase, medium subunit) in L-arabinose catabolism

Or see clustering for step aldox-med

Or see all steps for L-arabinose catabolism

Or cluster curated proteins matching a keyword

Definition of aldox-med

Fetched 2 sequences

Running ublast to find other characterized proteins with 40% identity and 70% coverage

Found hits to 2 other characterized sequences. (Found 4 hits including self hits.)

Removing ignored items reduces this to 0 close sequences.

Close but ignored sequences

(Sequences that are similar to these will still be high-confidence candidates for aldox-med.)

F9VNL6 glyceraldehyde dehydrogenase (FAD-containing) (subunit 2/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 283 amino acids: PaperBLAST, CDD, BRENDA::F9VNL6
50% identical to

CUTB_SULAC / Q4J6M6 Glyceraldehyde dehydrogenase medium chain; Glyceraldehyde dehydrogenase subunit B; Glyceraldehyde dehydrogenase subunit beta; EC 1.2.99.8 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 281 amino acids: PaperBLAST, CDD

Q974U9 glyceraldehyde dehydrogenase (FAD-containing) (subunit 2/3) (EC 1.2.99.8) from Sulfurisphaera tokodaii
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 278 amino acids: PaperBLAST, CDD, BRENDA::Q974U9
47% identical to

CUTB_SULAC / Q4J6M6 Glyceraldehyde dehydrogenase medium chain; Glyceraldehyde dehydrogenase subunit B; Glyceraldehyde dehydrogenase subunit beta; EC 1.2.99.8 from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 281 amino acids: PaperBLAST, CDD