GapMind for catabolism of small carbon sources


Clusters of Characterized Proteins

Clustering the characterized proteins for aldox-med ((glycol)aldehyde oxidoreductase, medium subunit) in L-arabinose catabolism

Or see other characterized proteins similar to aldox-med

Or see all steps for L-arabinose catabolism

Or cluster curated proteins matching a keyword

Definition of aldox-med

Fetched 2 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 2 of these sequences

Found 1 clusters of similar sequences. Download as table or as draft rules or view by cluster

Saccharolobus solfataricus

Q97VI7 glycolaldehyde oxidoreductase medium subunit from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 282 amino acids: PaperBLAST, CDD (Cluster 1)

Sulfolobus acidocaldarius

CUTB_SULAC / Q4J6M6 Glyceraldehyde dehydrogenase medium chain; Glyceraldehyde dehydrogenase subunit B; Glyceraldehyde dehydrogenase subunit beta; EC from Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
PFams: FAD_binding_5, CO_deh_flav_C
Heteromeric, 281 amino acids: PaperBLAST, CDD (Cluster 1)